RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 ZFP82Q8N141 532 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 GRIFINA4D1Z8 144 aa9.68□□□□□ -0.86
PHGDH-221ENST00000641573 A8MTW9 85 aa9.68□□□□□ -0.86
PHGDH-221ENST00000641573 OR11H12B2RN74 326 aa9.68□□□□□ -0.86
PHGDH-221ENST00000641573 COX19Q49B96 90 aa9.68□□□□□ -0.86
PHGDH-221ENST00000641573 C9orf66Q5T8R8 295 aa9.68□□□□□ -0.86
PHGDH-221ENST00000641573 ZNF575Q86XF7 245 aa9.68□□□□□ -0.86
PHGDH-221ENST00000641573 TRAPPC1Q9Y5R8 145 aa9.68□□□□□ -0.86
PHGDH-221ENST00000641573 C7orf71A4D174 169 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 RBMY1BA6NDE4 496 aaKnown RBP9.67□□□□□ -0.86
PHGDH-221ENST00000641573 RBMY1EA6NEQ0 496 aaKnown RBP9.67□□□□□ -0.86
PHGDH-221ENST00000641573 M0R2Z0 102 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 RBMY1DP0C7P1 496 aaKnown RBP9.67□□□□□ -0.86
PHGDH-221ENST00000641573 CDKN1BP46527 198 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 INSL3P51460 131 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 WDR73Q6P4I2 378 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 ATP5L2Q7Z4Y8 100 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 TPPP3Q9BW30 176 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 GNB1LQ9BYB4 327 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 NAGKQ9UJ70 344 aa9.67□□□□□ -0.86
PHGDH-221ENST00000641573 TRAV12-3A0A0B4J271 114 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 A0A1B0GXF2 115 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 SNURFLB1AK76 121 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 PHOX2AO14813 284 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 IGLC6P0CF74 106 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 RAB4BP61018 213 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 FABP9Q0Z7S8 132 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 RASL11AQ6T310 242 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 LYZL1Q6UWQ5 148 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 FRZBQ92765 325 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 DNAH3Q8TD57 4116 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
PHGDH-221ENST00000641573 TRAV12-2A0A075B6T6 113 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 A0A1B0GUT8 65 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 CD7P09564 240 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 CTRLP40313 264 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 CAMPP49913 170 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 FXYD7P58549 80 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 HBBP68871 147 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 RIGQ13278 110 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 WFDC9Q8NEX5 89 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 WWC2-AS2Q96NR7 200 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 CLUHP3Q96NS8 147 aa9.65□□□□□ -0.86
PHGDH-221ENST00000641573 MCRIP2Q9BUT9 160 aaKnown RBP9.65□□□□□ -0.86
PHGDH-221ENST00000641573 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
PHGDH-221ENST00000641573 NOTCH3Q9UM47 2321 aa9.64□□□□□ -0.87
PHGDH-221ENST00000641573 ZNF324O75467 553 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-221ENST00000641573 MT-ND6P03923 174 aa9.64□□□□□ -0.87
PHGDH-221ENST00000641573 TRGC1P0CF51 173 aa9.64□□□□□ -0.87
PHGDH-221ENST00000641573 OXLD1Q5BKU9 147 aa9.64□□□□□ -0.87
PHGDH-221ENST00000641573 STHQ8IWL8 128 aa9.64□□□□□ -0.87
PHGDH-221ENST00000641573 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
PHGDH-221ENST00000641573 A0A1B0GW15 77 aa9.63□□□□□ -0.87
PHGDH-221ENST00000641573 HLA-DQA1P01909 254 aa9.63□□□□□ -0.87
PHGDH-221ENST00000641573 FAM159AQ6UWV7 190 aa9.63□□□□□ -0.87
PHGDH-221ENST00000641573 TRPT1Q86TN4 253 aaKnown RBP9.63□□□□□ -0.87
PHGDH-221ENST00000641573 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
PHGDH-221ENST00000641573 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 F2Z2F3 143 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-221ENST00000641573 GNRH2O43555 120 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BKO60814 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 APCSP02743 223 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 S100A8P05109 93 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BJP06899 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 IGLL1P15814 213 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BOP23527 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BBP33778 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 ASIPP42127 132 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BDP58876 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 SSTP61278 116 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BCP62807 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST2H2BEQ16778 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BHQ93079 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 KCNS1Q96KK3 526 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BNQ99877 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 HIST1H2BMQ99879 126 aa9.62□□□□□ -0.87
PHGDH-221ENST00000641573 H3BVH4 76 aa9.61□□□□□ -0.87
PHGDH-221ENST00000641573 SNAI2O43623 268 aa9.61□□□□□ -0.87
PHGDH-221ENST00000641573 DNLZQ5SXM8 178 aa9.61□□□□□ -0.87
PHGDH-221ENST00000641573 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
PHGDH-221ENST00000641573 SSBP4Q9BWG4 385 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-221ENST00000641573 WFDC10AQ9H1F0 79 aa9.61□□□□□ -0.87
PHGDH-221ENST00000641573 TIMM8BQ9Y5J9 83 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-221ENST00000641573 IGHV1OR15-1A0A075B7D0 117 aa9.6□□□□□ -0.87
PHGDH-221ENST00000641573 AMBPP02760 352 aa9.6□□□□□ -0.87
PHGDH-221ENST00000641573 OR5AL1P0C617 328 aa9.6□□□□□ -0.87
PHGDH-221ENST00000641573 RBMY1A1P0DJD3 496 aaKnown RBP9.6□□□□□ -0.87
PHGDH-221ENST00000641573 RBMY1CP0DJD4 496 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms