RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
PHGDH-213ENST00000641272 WFDC1Q9HC57 220 aa11.29□□□□□ -0.6
PHGDH-213ENST00000641272 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
PHGDH-213ENST00000641272 CRYGDP07320 174 aa11.28□□□□□ -0.6
PHGDH-213ENST00000641272 PET100P0DJ07 73 aa11.28□□□□□ -0.6
PHGDH-213ENST00000641272 RPL12P30050 165 aaKnown RBP11.28□□□□□ -0.6
PHGDH-213ENST00000641272 PPT1P50897 306 aa11.28□□□□□ -0.6
PHGDH-213ENST00000641272 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
PHGDH-213ENST00000641272 TVP23CQ96ET8 276 aa11.28□□□□□ -0.6
PHGDH-213ENST00000641272 TXNDC17Q9BRA2 123 aa11.28□□□□□ -0.6
PHGDH-213ENST00000641272 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
PHGDH-213ENST00000641272 M0R2P5 195 aa11.27□□□□□ -0.61
PHGDH-213ENST00000641272 TREM1Q9NP99 234 aa11.27□□□□□ -0.61
PHGDH-213ENST00000641272 INAFM2P0DMQ5 153 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 ACOT6Q3I5F7 207 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-213ENST00000641272 TDRG1Q3Y452 100 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 FAM74A1Q5RGS3 127 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 LINC00299Q6ZSB3 139 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 Q9HAA7 133 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 SDF2L1Q9HCN8 221 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 HERC1Q15751 4861 aa11.26□□□□□ -0.61
PHGDH-213ENST00000641272 A0A1W2PPV4 95 aa11.25□□□□□ -0.61
PHGDH-213ENST00000641272 SMR3BP02814 79 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-213ENST00000641272 GATA1P15976 413 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-213ENST00000641272 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
PHGDH-213ENST00000641272 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
PHGDH-213ENST00000641272 PSCAO43653 123 aa11.24□□□□□ -0.61
PHGDH-213ENST00000641272 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
PHGDH-213ENST00000641272 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
PHGDH-213ENST00000641272 ASB13Q8WXK3 278 aa11.24□□□□□ -0.61
PHGDH-213ENST00000641272 FRZBQ92765 325 aa11.24□□□□□ -0.61
PHGDH-213ENST00000641272 MARVELD1Q9BSK0 173 aa11.24□□□□□ -0.61
PHGDH-213ENST00000641272 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
PHGDH-213ENST00000641272 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
PHGDH-213ENST00000641272 GCSHP23434 173 aa11.23□□□□□ -0.61
PHGDH-213ENST00000641272 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
PHGDH-213ENST00000641272 C10orf126Q8N4M7 172 aa11.23□□□□□ -0.61
PHGDH-213ENST00000641272 OR10G9Q8NGN4 311 aa11.23□□□□□ -0.61
PHGDH-213ENST00000641272 OR10G7Q8NGN6 311 aa11.23□□□□□ -0.61
PHGDH-213ENST00000641272 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
PHGDH-213ENST00000641272 IGHV3-30P01768 117 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 IGHV3-33P01772 117 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 IGHV3-30-3P0DP02 117 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 IGHV3-30-5P0DP03 117 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 CDC34P49427 236 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-213ENST00000641272 ZNF80P51504 273 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-213ENST00000641272 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 HSD17B11Q8NBQ5 300 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 VPS13BQ7Z7G8 4022 aa11.22□□□□□ -0.61
PHGDH-213ENST00000641272 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.61
PHGDH-213ENST00000641272 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
PHGDH-213ENST00000641272 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.61
PHGDH-213ENST00000641272 KCNS1Q96KK3 526 aa11.21□□□□□ -0.61
PHGDH-213ENST00000641272 K7EP13 123 aa11.2□□□□□ -0.62
PHGDH-213ENST00000641272 GCGP01275 180 aa11.2□□□□□ -0.62
PHGDH-213ENST00000641272 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
PHGDH-213ENST00000641272 CFAP126Q5VTH2 177 aa11.2□□□□□ -0.62
PHGDH-213ENST00000641272 DMBT1Q9UGM3 2413 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-213ENST00000641272 LRCOL1A6NCL2 159 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 RS1O15537 224 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 TCRAP04437 139 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 DEFA1P59665 94 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 DEFA3P59666 94 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 RHOHQ15669 191 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 SH2D6Q7Z4S9 175 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 Q8N3U1 123 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
PHGDH-213ENST00000641272 TRAV8-6A0A0B4J262 113 aa11.18□□□□□ -0.62
PHGDH-213ENST00000641272 GGTLC3B5MD39 225 aa11.18□□□□□ -0.62
PHGDH-213ENST00000641272 TIRAPP58753 221 aa11.18□□□□□ -0.62
PHGDH-213ENST00000641272 ZNF506Q5JVG8 444 aa11.18□□□□□ -0.62
PHGDH-213ENST00000641272 PRNTQ86SH4 94 aa11.18□□□□□ -0.62
PHGDH-213ENST00000641272 PRADC1Q9BSG0 188 aa11.18□□□□□ -0.62
PHGDH-213ENST00000641272 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
PHGDH-213ENST00000641272 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 STAG3L2P0CL84 134 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 STAG3L3P0CL85 134 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 GCHFRP30047 84 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 C9orf85Q96MD7 179 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 SH3BGRL3Q9H299 93 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 MYCBP2O75592 4640 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-213ENST00000641272 DNAH8Q96JB1 4490 aa11.17□□□□□ -0.62
PHGDH-213ENST00000641272 IBA57-AS1B1ANH7 110 aa11.16□□□□□ -0.62
PHGDH-213ENST00000641272 PFN1P07737 140 aaKnown RBP11.16□□□□□ -0.62
PHGDH-213ENST00000641272 ATP6V0CP27449 155 aa11.16□□□□□ -0.62
PHGDH-213ENST00000641272 WFDC2Q14508 124 aa11.16□□□□□ -0.62
PHGDH-213ENST00000641272 ZFP69Q49AA0 526 aa11.16□□□□□ -0.62
PHGDH-213ENST00000641272 ARL6IP6Q8N6S5 226 aa11.16□□□□□ -0.62
PHGDH-213ENST00000641272 Q8N814 137 aa11.16□□□□□ -0.62
PHGDH-213ENST00000641272 ALG5Q9Y673 324 aa11.16□□□□□ -0.62
PHGDH-213ENST00000641272 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.62
PHGDH-213ENST00000641272 TRBV6-4A0A1B0GX49 114 aa11.15□□□□□ -0.62
PHGDH-213ENST00000641272 IGLV2-11P01706 119 aa11.15□□□□□ -0.62
PHGDH-213ENST00000641272 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.62
PHGDH-213ENST00000641272 FLI1Q01543 452 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-213ENST00000641272 SMUG1Q53HV7 270 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms