RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 IGKV3D-20A0A0C4DH25 116 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 LYRM9A8MSI8 78 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 SH2D1AO60880 128 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 SRP19P09132 144 aaKnown RBP9.4□□□□□ -0.9
GTF3A-209ENST00000640289 CEBPGP53567 150 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 SRSF3P84103 164 aaKnown RBP9.4□□□□□ -0.9
GTF3A-209ENST00000640289 ZNF674Q2M3X9 581 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 IBA57Q5T440 356 aaKnown RBP9.4□□□□□ -0.9
GTF3A-209ENST00000640289 PARLQ9H300 379 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
GTF3A-209ENST00000640289 TRGV11A0A075B6L2 103 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 DEFB130BP0DP73 79 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 DEFB130AP0DP74 79 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 GNG4P50150 75 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 TCL1AP56279 114 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 RAB14P61106 215 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 DAD1P61803 113 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 PRR27Q6MZM9 219 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 SDF2L1Q9HCN8 221 aa9.39□□□□□ -0.91
GTF3A-209ENST00000640289 IGHV3-16A0A0C4DH30 117 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 TEX48A0A1B0GUV7 120 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 C9JQL5 133 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 C3orf84H3BNL1 204 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 M0R036 132 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 ORM1P02763 201 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 MGST1P10620 155 aaKnown RBP9.38□□□□□ -0.91
GTF3A-209ENST00000640289 ZNF415Q09FC8 603 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 DAZ2Q13117 558 aaKnown RBP9.38□□□□□ -0.91
GTF3A-209ENST00000640289 CLLU1Q5K131 121 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 CASC10Q5T4H9 136 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 Q6ZTI0 123 aa9.38□□□□□ -0.91
GTF3A-209ENST00000640289 PHLDA1Q8WV24 401 aaPredicted RBP9.38□□□□□ -0.91
GTF3A-209ENST00000640289 TMSB15BA0A087X1C1 80 aa9.37□□□□□ -0.91
GTF3A-209ENST00000640289 GAGE12BA1L429 117 aa9.37□□□□□ -0.91
GTF3A-209ENST00000640289 B4DEV8 164 aa9.37□□□□□ -0.91
GTF3A-209ENST00000640289 GAGE7O76087 117 aa9.37□□□□□ -0.91
GTF3A-209ENST00000640289 GAGE12FP0CL80 117 aa9.37□□□□□ -0.91
GTF3A-209ENST00000640289 GAGE12GP0CL81 117 aa9.37□□□□□ -0.91
GTF3A-209ENST00000640289 GAGE12IP0CL82 117 aa9.37□□□□□ -0.91
GTF3A-209ENST00000640289 MRPL16Q9NX20 251 aaKnown RBP9.37□□□□□ -0.91
GTF3A-209ENST00000640289 TRGV1A0A0A0MS02 117 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 GRIFINA4D1Z8 144 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 KRBOX1C9JBD0 128 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 C9JCJ5 164 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 SPINK4O60575 86 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
GTF3A-209ENST00000640289 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
GTF3A-209ENST00000640289 OR5I1Q13606 314 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 ZNF575Q86XF7 245 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
GTF3A-209ENST00000640289 TRAV10A0A0B4J240 114 aa9.35□□□□□ -0.91
GTF3A-209ENST00000640289 K7EN84 100 aa9.35□□□□□ -0.91
GTF3A-209ENST00000640289 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
GTF3A-209ENST00000640289 HTN3P15516 51 aa9.35□□□□□ -0.91
GTF3A-209ENST00000640289 PEA15Q15121 130 aa9.35□□□□□ -0.91
GTF3A-209ENST00000640289 CEMP1Q6PRD7 247 aaPredicted RBP9.35□□□□□ -0.91
GTF3A-209ENST00000640289 OCC1Q8TAD7 63 aa9.35□□□□□ -0.91
GTF3A-209ENST00000640289 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
GTF3A-209ENST00000640289 SMIM7Q9BQ49 75 aa9.35□□□□□ -0.91
GTF3A-209ENST00000640289 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
GTF3A-209ENST00000640289 NUPR2A6NF83 97 aa9.34□□□□□ -0.91
GTF3A-209ENST00000640289 ASIPP42127 132 aa9.34□□□□□ -0.91
GTF3A-209ENST00000640289 C9orf85Q96MD7 179 aa9.34□□□□□ -0.91
GTF3A-209ENST00000640289 SPXQ9BT56 116 aa9.34□□□□□ -0.91
GTF3A-209ENST00000640289 C19orf71A6NCJ1 209 aa9.33□□□□□ -0.92
GTF3A-209ENST00000640289 ZNF727A8MUV8 499 aa9.33□□□□□ -0.92
GTF3A-209ENST00000640289 S100A4P26447 101 aaKnown RBP9.33□□□□□ -0.92
GTF3A-209ENST00000640289 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
GTF3A-209ENST00000640289 TRGV2A0A075B6R0 118 aa9.32□□□□□ -0.92
GTF3A-209ENST00000640289 H3BVH4 76 aa9.32□□□□□ -0.92
GTF3A-209ENST00000640289 M0R2P5 195 aa9.32□□□□□ -0.92
GTF3A-209ENST00000640289 ATP5G1P05496 136 aa9.32□□□□□ -0.92
GTF3A-209ENST00000640289 LGALS9BQ3B8N2 356 aa9.32□□□□□ -0.92
GTF3A-209ENST00000640289 SMDT1Q9H4I9 107 aa9.32□□□□□ -0.92
GTF3A-209ENST00000640289 IGLL5B9A064 214 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 F5H768 121 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 P01737 135 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 RASL10AQ92737 203 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 NUDT11Q96G61 164 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 RNASE7Q9H1E1 156 aaKnown RBP9.31□□□□□ -0.92
GTF3A-209ENST00000640289 BIN3Q9NQY0 253 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 LY96Q9Y6Y9 160 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 CSMD3Q7Z407 3707 aa9.31□□□□□ -0.92
GTF3A-209ENST00000640289 SFTA3P0C7M3 94 aa9.3□□□□□ -0.92
GTF3A-209ENST00000640289 GZMBP10144 247 aa9.3□□□□□ -0.92
GTF3A-209ENST00000640289 HOXA5P20719 270 aa9.3□□□□□ -0.92
GTF3A-209ENST00000640289 LINC01551Q86U37 167 aa9.3□□□□□ -0.92
GTF3A-209ENST00000640289 OR2D3Q8NGH3 330 aa9.3□□□□□ -0.92
GTF3A-209ENST00000640289 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
GTF3A-209ENST00000640289 IL36BQ9NZH7 164 aa9.3□□□□□ -0.92
GTF3A-209ENST00000640289 KLK5Q9Y337 293 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms