RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MRPL53Q96EL3 112 aaKnown RBP14.53□□□□□ -0.08
SCARB2-213ENST00000638680 IGF2BP2-AS1Q96M15 143 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 RNF114Q9Y508 228 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 IGFL3Q6UXB1 125 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 TEX48A0A1B0GUV7 120 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 FAM215AQ9Y5M1 114 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 ANKRD39Q53RE8 183 aa14.52□□□□□ -0.08
SCARB2-213ENST00000638680 RBAKDNA6NC62 111 aa14.52□□□□□ -0.09
SCARB2-213ENST00000638680 SPRNQ5BIV9 151 aa14.52□□□□□ -0.09
SCARB2-213ENST00000638680 KAAG1Q9UBP8 84 aa14.52□□□□□ -0.09
SCARB2-213ENST00000638680 WDR81Q562E7 1941 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 GP9P14770 177 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 C8orf31Q8N9H6 132 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 MRAPQ8TCY5 172 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-213ENST00000638680 IGKV2-29A2NJV5 120 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-213ENST00000638680 LINC01545Q5VT33 79 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 RHOHQ15669 191 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 CTSZQ9UBR2 303 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 SS18L2Q9UHA2 77 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 DOCK8Q8NF50 2099 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 A0A096LPF7 62 aa14.51□□□□□ -0.09
SCARB2-213ENST00000638680 K7EMI3 77 aa14.5□□□□□ -0.09
SCARB2-213ENST00000638680 RPL39LQ96EH5 51 aaKnown RBP14.5□□□□□ -0.09
SCARB2-213ENST00000638680 MGAMO43451 1857 aa14.5□□□□□ -0.09
SCARB2-213ENST00000638680 CLPSL2Q6UWE3 100 aa14.5□□□□□ -0.09
SCARB2-213ENST00000638680 IGFBPL1Q8WX77 278 aa14.5□□□□□ -0.09
SCARB2-213ENST00000638680 B5MCH6 92 aa14.5□□□□□ -0.09
SCARB2-213ENST00000638680 K7ENP7 123 aa14.49□□□□□ -0.09
SCARB2-213ENST00000638680 HOXB4P17483 251 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-213ENST00000638680 SPTBN1Q01082 2364 aaKnown RBP14.49□□□□□ -0.09
SCARB2-213ENST00000638680 BAALC-AS2P0C853 105 aa14.49□□□□□ -0.09
SCARB2-213ENST00000638680 Q9H8V8 135 aa14.49□□□□□ -0.09
SCARB2-213ENST00000638680 DIDO1Q9BTC0 2240 aaKnown RBP14.49□□□□□ -0.09
SCARB2-213ENST00000638680 C22orf46C9J442 243 aa14.49□□□□□ -0.09
SCARB2-213ENST00000638680 PATE2Q6UY27 113 aa14.48□□□□□ -0.09
SCARB2-213ENST00000638680 MSRB1Q9NZV6 116 aa14.48□□□□□ -0.09
SCARB2-213ENST00000638680 KRTAP27-1Q3LI81 207 aa14.48□□□□□ -0.09
SCARB2-213ENST00000638680 RITA1Q96K30 269 aa14.47□□□□□ -0.09
SCARB2-213ENST00000638680 RNASE8Q8TDE3 154 aaKnown RBP14.47□□□□□ -0.09
SCARB2-213ENST00000638680 ROS1P08922 2347 aa14.47□□□□□ -0.09
SCARB2-213ENST00000638680 SHISA9B4DS77 424 aa14.47□□□□□ -0.09
SCARB2-213ENST00000638680 FOXI2Q6ZQN5 318 aa14.47□□□□□ -0.09
SCARB2-213ENST00000638680 CRYGCP07315 174 aa14.47□□□□□ -0.09
SCARB2-213ENST00000638680 KMT2EQ8IZD2 1858 aa14.47□□□□□ -0.09
SCARB2-213ENST00000638680 LYPD6Q86Y78 171 aa14.47□□□□□ -0.09
SCARB2-213ENST00000638680 I3L2K1 104 aa14.46□□□□□ -0.09
SCARB2-213ENST00000638680 GTSF1Q8WW33 167 aa14.46□□□□□ -0.1
SCARB2-213ENST00000638680 ANGP03950 147 aaKnown RBP14.46□□□□□ -0.1
SCARB2-213ENST00000638680 SP5Q6BEB4 398 aaPredicted RBP14.46□□□□□ -0.1
SCARB2-213ENST00000638680 PRSS33Q8NF86 280 aa14.45□□□□□ -0.1
SCARB2-213ENST00000638680 ZNF407Q9C0G0 2248 aa14.45□□□□□ -0.1
SCARB2-213ENST00000638680 LHBP01229 141 aa14.45□□□□□ -0.1
SCARB2-213ENST00000638680 U3KQE9 123 aa14.45□□□□□ -0.1
SCARB2-213ENST00000638680 LENEPQ9Y5L5 61 aa14.44□□□□□ -0.1
SCARB2-213ENST00000638680 ARFGEF3Q5TH69 2177 aa14.44□□□□□ -0.1
SCARB2-213ENST00000638680 FXYD2P54710 66 aa14.44□□□□□ -0.1
SCARB2-213ENST00000638680 XCL1P47992 114 aa14.44□□□□□ -0.1
SCARB2-213ENST00000638680 Q6ZSR3 168 aa14.44□□□□□ -0.1
SCARB2-213ENST00000638680 H3BUA1 57 aa14.44□□□□□ -0.1
SCARB2-213ENST00000638680 MUSTN1Q8IVN3 82 aa14.44□□□□□ -0.1
SCARB2-213ENST00000638680 Q96MF0 132 aa14.43□□□□□ -0.1
SCARB2-213ENST00000638680 NOP10Q9NPE3 64 aaKnown RBP14.43□□□□□ -0.1
SCARB2-213ENST00000638680 TAX1BP3O14907 124 aa14.43□□□□□ -0.1
SCARB2-213ENST00000638680 ORMDL1Q9P0S3 153 aa14.43□□□□□ -0.1
SCARB2-213ENST00000638680 K7EIM0 57 aa14.43□□□□□ -0.1
SCARB2-213ENST00000638680 HOXD3P31249 432 aaPredicted RBP14.43□□□□□ -0.1
SCARB2-213ENST00000638680 TTTY13Q9BZ97 58 aa14.43□□□□□ -0.1
SCARB2-213ENST00000638680 CNOT1A5YKK6 2376 aaKnown RBP14.43□□□□□ -0.1
SCARB2-213ENST00000638680 CR1LQ2VPA4 569 aa14.42□□□□□ -0.1
SCARB2-213ENST00000638680 SLC25A29Q8N8R3 303 aa14.42□□□□□ -0.1
SCARB2-213ENST00000638680 FAM167A-AS1Q96KT0 104 aa14.42□□□□□ -0.1
SCARB2-213ENST00000638680 DOCK10Q96BY6 2186 aa14.42□□□□□ -0.1
SCARB2-213ENST00000638680 PRSS47A8MTI9 375 aa14.42□□□□□ -0.1
SCARB2-213ENST00000638680 FRMD6-AS1P0C7T7 363 aa14.42□□□□□ -0.1
SCARB2-213ENST00000638680 ZFP2Q6ZN57 461 aa14.41□□□□□ -0.1
SCARB2-213ENST00000638680 EP300Q09472 2414 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-213ENST00000638680 PKDREJQ9NTG1 2253 aa14.41□□□□□ -0.1
SCARB2-213ENST00000638680 ELANEP08246 267 aa14.41□□□□□ -0.1
SCARB2-213ENST00000638680 WFDC2Q14508 124 aa14.41□□□□□ -0.1
SCARB2-213ENST00000638680 IGKV1-17P01599 117 aa14.41□□□□□ -0.1
SCARB2-213ENST00000638680 A4D1N5 150 aa14.4□□□□□ -0.1
SCARB2-213ENST00000638680 ICOSQ9Y6W8 199 aa14.4□□□□□ -0.1
SCARB2-213ENST00000638680 ACYP1P07311 99 aa14.4□□□□□ -0.1
SCARB2-213ENST00000638680 NPBQ8NG41 125 aa14.4□□□□□ -0.1
SCARB2-213ENST00000638680 ANAPC1Q9H1A4 1944 aa14.39□□□□□ -0.11
SCARB2-213ENST00000638680 HERV-K104P63124 156 aa14.39□□□□□ -0.11
SCARB2-213ENST00000638680 hADV29S1A0JD25 119 aa14.39□□□□□ -0.11
SCARB2-213ENST00000638680 CADP27708 2225 aa14.39□□□□□ -0.11
SCARB2-213ENST00000638680 A0A0J9YXV3 536 aa14.39□□□□□ -0.11
SCARB2-213ENST00000638680 J3QLI3 93 aa14.39□□□□□ -0.11
SCARB2-213ENST00000638680 RBM3P98179 157 aaKnown RBP14.39□□□□□ -0.11
SCARB2-213ENST00000638680 APOC4P55056 127 aa14.39□□□□□ -0.11
SCARB2-213ENST00000638680 IGLV11-55A0A075B6I3 123 aa14.38□□□□□ -0.11
SCARB2-213ENST00000638680 IGLV2-14P01704 120 aa14.38□□□□□ -0.11
SCARB2-213ENST00000638680 IGHV7-81A0A0B4J1V7 117 aa14.38□□□□□ -0.11
SCARB2-213ENST00000638680 RNF138Q8WVD3 245 aa14.37□□□□□ -0.11
SCARB2-213ENST00000638680 CTSGP08311 255 aa14.37□□□□□ -0.11
SCARB2-213ENST00000638680 KIAA1671Q9BY89 1806 aa14.37□□□□□ -0.11
SCARB2-213ENST00000638680 CENPVL3A0A0U1RRI6 287 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms