RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 F8W735 103 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 EDN2P20800 178 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 ZNF726P1Q15940 193 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 SPINK13Q1W4C9 94 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 FAM90A2PQ658T7 463 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 OR8A1Q8NGG7 326 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 FXYD5Q96DB9 178 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 LINC00477Q96M19 166 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 ASCL2Q99929 193 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 ZNF331Q9NQX6 463 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 YTHDF2Q9Y5A9 579 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 CSMD1Q96PZ7 3565 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 TRGC2P03986 189 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 TCRAP04437 139 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 CD7P09564 240 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 ZNF138P52744 262 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 WIPF2Q8TF74 440 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 C1QTNF4Q9BXJ3 329 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 PARLQ9H300 379 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 CA1P00915 261 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 CENPWQ5EE01 88 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 LINC00482Q8N8I6 264 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 SIGMAR1Q99720 223 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 SRD5A3Q9H8P0 318 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 NAT8Q9UHE5 227 aa6.5□□□□□ -1.37
CACNA1A-254ENST00000637952 TRAV12-3A0A0B4J271 114 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 SCGB1D1O95968 90 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 LEPP41159 167 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 DEFB1P60022 68 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 LINC00479Q96M42 142 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 TMEM189A5PLL7 270 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 SLC17A3O00476 420 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 SPINK4O60575 86 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 TRAV1-1A0A0B4J248 108 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 TMEM250H0YL14 139 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 APOC4P55056 127 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 ZNF506Q5JVG8 444 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 KCNIP4Q6PIL6 250 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 FMC1Q96HJ9 113 aa6.49□□□□□ -1.37
CACNA1A-254ENST00000637952 PPP1R2P9O14990 202 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 SMIM20Q8N5G0 67 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 SMDT1Q9H4I9 107 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 ERG28Q9UKR5 140 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 F5H697 171 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 M0R2Z0 102 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 TCL1AP56279 114 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 OR10G8Q8NGN5 311 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 FAM167A-AS1Q96KT0 104 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 TGIF2-C20orf24A0A0A6YYL0 155 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 IZUMO1RA6ND01 250 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 SNURFLB1AK76 121 aa6.48□□□□□ -1.37
CACNA1A-254ENST00000637952 FABP5P3A8MUU1 101 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 KRTAP10-3P60369 221 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 FOXI2Q6ZQN5 318 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 FER1L6-AS1Q8NA97 138 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 OTOGQ6ZRI0 2925 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 LOC102724200A0A096LPH7 203 aaPredicted RBP6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 C9JCJ5 164 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 DIRC3C9JPN6 131 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 OR2K2Q8NGT1 345 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 NF1P21359 2839 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 CSMD2Q7Z408 3487 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 GRIFINA4D1Z8 144 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 GGTLC3B5MD39 225 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 INSP01308 110 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 HTN3P15516 51 aa6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 IBA57Q5T440 356 aaKnown RBP6.47□□□□□ -1.37
CACNA1A-254ENST00000637952 MYOZ3Q8TDC0 251 aa6.46□□□□□ -1.37
CACNA1A-254ENST00000637952 VGLL1Q99990 258 aa6.46□□□□□ -1.37
CACNA1A-254ENST00000637952 ZMAT4Q9H898 229 aa6.46□□□□□ -1.37
CACNA1A-254ENST00000637952 MAP6D1Q9H9H5 199 aa6.46□□□□□ -1.37
CACNA1A-254ENST00000637952 PHLDA3Q9Y5J5 127 aa6.46□□□□□ -1.37
CACNA1A-254ENST00000637952 K7EQG2 157 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 NUPR1O60356 82 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 TNFRSF6BO95407 300 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 SRP19P09132 144 aaKnown RBP6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 ESDP10768 282 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 RNF183Q96D59 192 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 ARL2-SNX15V9GYD0 113 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 MRAP2Q96G30 205 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 DERL1Q9BUN8 251 aa6.46□□□□□ -1.38
CACNA1A-254ENST00000637952 CELSR1Q9NYQ6 3014 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 A0A087WWC5 75 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 IGLV1-51P01701 117 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 IGLC2P0DOY2 106 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 TMEM183BQ1AE95 376 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 AGPAT4-IT1Q9H0P7 198 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 A8MWL6 223 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 B4DEV8 164 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 PRAC2D3DTV9 90 aa6.45□□□□□ -1.38
CACNA1A-254ENST00000637952 K7ERU9 68 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms