RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 HIST1H2BBP33778 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BDP58876 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BCP62807 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 RPL11P62913 178 aaKnown RBP5.64□□□□□ -1.51
PNKP-229ENST00000637897 PAFAH1B2P68402 229 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 PSG3Q16557 428 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST2H2BEQ16778 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 CT83Q5H943 113 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 PSMG4Q5JS54 123 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 ACTL10Q5JWF8 245 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.64□□□□□ -1.51
PNKP-229ENST00000637897 GOLT1AQ6ZVE7 132 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 Q86TA4 180 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 TMEM183AQ8IXX5 376 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 FRZBQ92765 325 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BHQ93079 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 C20orf173Q96LM9 149 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BNQ99877 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BMQ99879 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 SLC50A1Q9BRV3 221 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 MLST8Q9BVC4 326 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
PNKP-229ENST00000637897 DNAH11Q96DT5 4516 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 DIRC3C9JPN6 131 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 IGLV2-11P01706 119 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 MT-ND6P03923 174 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 S100A8P05109 93 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 TRGC1P0CF51 173 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 HOXA5P20719 270 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 NDUFA6P56556 154 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 FABP9Q0Z7S8 132 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 WDR73Q6P4I2 378 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 RASL11AQ6T310 242 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 PRNTQ86SH4 94 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 STHQ8IWL8 128 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 NHLRC2Q8NBF2 726 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 NUDT10Q8NFP7 164 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 OR4B1Q8NGF8 309 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 C11orf45Q8TAV5 145 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 DAZAP1Q96EP5 407 aaKnown RBP5.63□□□□□ -1.51
PNKP-229ENST00000637897 NUDT11Q96G61 164 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 TRAPPC1Q9Y5R8 145 aa5.63□□□□□ -1.51
PNKP-229ENST00000637897 PKHD1P08F94 4074 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 C19orf71A6NCJ1 209 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 FAM231BA6NCW3 169 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 A8MWL6 223 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 F6UB75 175 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 P01737 135 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 AKR1D1P51857 326 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 C12orf74Q32Q52 190 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 SAPCD1Q5SSQ6 148 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 LGALS9CQ6DKI2 356 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 PRR27Q6MZM9 219 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 Q6ZTC4 211 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 TSKUQ8WUA8 353 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
PNKP-229ENST00000637897 GNB1LQ9BYB4 327 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 GFRA4Q9GZZ7 299 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 RPP21Q9H633 154 aaKnown RBP5.62□□□□□ -1.51
PNKP-229ENST00000637897 NRN1Q9NPD7 142 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 ZNF331Q9NQX6 463 aaPredicted RBP5.62□□□□□ -1.51
PNKP-229ENST00000637897 NAT8BQ9UHF3 227 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 PSG8Q9UQ74 426 aa5.62□□□□□ -1.51
PNKP-229ENST00000637897 PKD1P98161 4303 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 TRAV8-1A0A0A6YYK1 113 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 TRAV8-2A0A0B4J237 113 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 RBAKDNA6NC62 111 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 A8MTW9 85 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 NPIPB6E9PJ23 425 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 PRM2P04554 102 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 CT45A10P0DMU9 189 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 HLA-DRB4P13762 266 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 HLA-DMBP28068 263 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 FXYD7P58549 80 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 COA6Q5JTJ3 125 aaKnown RBP5.61□□□□□ -1.51
PNKP-229ENST00000637897 AMTNQ6UX39 209 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 ZNF705AQ6ZN79 300 aaPredicted RBP5.61□□□□□ -1.51
PNKP-229ENST00000637897 ATP5L2Q7Z4Y8 100 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 C1orf158Q8N1D5 194 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 SGK494Q96LW2 274 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 XCL2Q9UBD3 114 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 HLA-DRB4X5D2U9 266 aa5.61□□□□□ -1.51
PNKP-229ENST00000637897 XKRY2A2RUG3 117 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 ZNF705FA8MVS1 300 aaPredicted RBP5.6□□□□□ -1.51
PNKP-229ENST00000637897 M0R3E3 92 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 HLA-DQA1P01909 254 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 ZNF705DP0CH99 300 aaPredicted RBP5.6□□□□□ -1.51
PNKP-229ENST00000637897 ZNF705BP0CI00 300 aaPredicted RBP5.6□□□□□ -1.51
PNKP-229ENST00000637897 PRB4P10163 310 aaPredicted RBP5.6□□□□□ -1.51
PNKP-229ENST00000637897 MIFP14174 115 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 S100A2P29034 98 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 TCL1AP56279 114 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 SMUG1Q53HV7 270 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 SAMD13Q5VXD3 122 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 IGFL4Q6B9Z1 124 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 MORN3Q6PF18 240 aaPredicted RBP5.6□□□□□ -1.51
PNKP-229ENST00000637897 COX8CQ7Z4L0 72 aa5.6□□□□□ -1.51
PNKP-229ENST00000637897 NDFIP1Q9BT67 221 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms