RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 LYRM7Q5U5X0 104 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 Q6AWC8 147 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 MRPL54Q6P161 138 aaKnown RBP2.25□□□□□ -2.05
CHD2-228ENST00000637613 UNQ9165/PRO28630Q6UXU0 137 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 FA2HQ7L5A8 372 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 TMEM144Q7Z5S9 345 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 OR8I2Q8N0Y5 310 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 ZNF664Q8N3J9 261 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 RPP25LQ8N5L8 163 aaKnown RBP2.25□□□□□ -2.05
CHD2-228ENST00000637613 OR10X1Q8NGY0 326 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 OR4A5Q8NH83 315 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 CHCHD1Q96BP2 118 aaKnown RBP2.25□□□□□ -2.05
CHD2-228ENST00000637613 YPEL2Q96QA6 119 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 VPS25Q9BRG1 176 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 TTTY12Q9BZ98 90 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 FBXL15Q9H469 300 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 LINC00574Q9H8X3 128 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 HES4Q9HCC6 221 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 OSTCQ9NRP0 149 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 CENPFP49454 3210 aa2.25□□□□□ -2.05
CHD2-228ENST00000637613 TRAV38-1A0A0B4J264 116 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 IGHV1-69-2A0A0G2JMI3 117 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 A0A1W2PRE2 83 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 hADV38S2A0JD32 116 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 GRIFINA4D1Z8 144 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 DPRXA6NFQ7 191 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 C10orf142B7Z368 130 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.24□□□□□ -2.05
CHD2-228ENST00000637613 LEPROTL1O95214 131 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 HLA-DRB1P01911 266 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 REG1AP05451 166 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 OR10J4P0C629 311 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 CD28P10747 220 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 CBLN1P23435 193 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 HSPE1P61604 102 aaKnown RBP2.24□□□□□ -2.05
CHD2-228ENST00000637613 HIST1H1AQ02539 215 aaPredicted RBP2.24□□□□□ -2.05
CHD2-228ENST00000637613 LINC00483Q53H64 154 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 TMEM97Q5BJF2 176 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 C10orf113Q5VZT2 155 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 SLC25A34Q6PIV7 304 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 FAM19A3Q7Z5A8 133 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 KRTAP11-1Q8IUC1 163 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 CNEP1R1Q8N9A8 125 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 ST20-AS1Q8NBB2 130 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 OR1L8Q8NGR8 309 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 SLC25A40Q8TBP6 338 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 CT55Q8WUE5 264 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 ZNF714Q96N38 554 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 GPR82Q96P67 336 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 NABP2Q9BQ15 211 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 TMEM70Q9BUB7 260 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 SCRT1Q9BWW7 348 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 SNHG12Q9BXW3 62 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 MS4A6AQ9H2W1 248 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 VSIRQ9H7M9 311 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 ST20Q9HBF5 79 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 LAMTOR2Q9Y2Q5 125 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 MRPS16Q9Y3D3 137 aaKnown RBP2.24□□□□□ -2.05
CHD2-228ENST00000637613 AMMECR1Q9Y4X0 333 aaPredicted RBP2.24□□□□□ -2.05
CHD2-228ENST00000637613 ALPK2Q86TB3 2170 aa2.24□□□□□ -2.05
CHD2-228ENST00000637613 MED12LQ86YW9 2145 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 COL27A1Q8IZC6 1860 aaPredicted RBP2.23□□□□□ -2.05
CHD2-228ENST00000637613 TRAV30A0A087WSZ9 112 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 IGHV3-43A0A0B4J1X8 118 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 IGHV1-46P01743 117 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 SLC25A5P05141 298 aaKnown RBP2.23□□□□□ -2.05
CHD2-228ENST00000637613 SCGB1C2P0DMR2 95 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 MPV17P39210 176 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 RPS20P60866 119 aaKnown RBP2.23□□□□□ -2.05
CHD2-228ENST00000637613 SEC11AP67812 179 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 PRCDQ00LT1 54 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 AESQ08117 197 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 SPINK9Q5DT21 86 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 MIC13Q5XKP0 118 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 BPIFA4PQ86YQ2 179 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 MIR7-3HGQ8N6C7 128 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 C5orf17Q8NAS9 161 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 OR5A1Q8NGJ0 315 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 OR4C13Q8NGP0 309 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 OR2K2Q8NGT1 345 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 OR10AG1Q8NH19 301 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 KLF14Q8TD94 323 aaPredicted RBP2.23□□□□□ -2.05
CHD2-228ENST00000637613 PTH2Q96A98 100 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 MGST2Q99735 147 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 ANAPC13Q9BS18 74 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 TMEM208Q9BTX3 173 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 S4R3C0 116 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 DIDO1Q9BTC0 2240 aaKnown RBP2.23□□□□□ -2.05
CHD2-228ENST00000637613 SHANK1Q9Y566 2161 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 CACNA1EQ15878 2313 aa2.23□□□□□ -2.05
CHD2-228ENST00000637613 HEATR1Q9H583 2144 aaKnown RBP2.23□□□□□ -2.05
CHD2-228ENST00000637613 DOCK10Q96BY6 2186 aa2.22□□□□□ -2.05
CHD2-228ENST00000637613 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.22□□□□□ -2.05
CHD2-228ENST00000637613 TRAV17A0A0B4J275 112 aa2.22□□□□□ -2.05
CHD2-228ENST00000637613 A0A0G2JMM0 328 aa2.22□□□□□ -2.05
CHD2-228ENST00000637613 A0A1W2PPB8 328 aa2.22□□□□□ -2.05
CHD2-228ENST00000637613 A0A1W2PRS3 328 aa2.22□□□□□ -2.05
CHD2-228ENST00000637613 SMIM27A0A1W2PRY6 76 aa2.22□□□□□ -2.05
CHD2-228ENST00000637613 TCRBV4S1A1TA0A5B7 111 aa2.22□□□□□ -2.05
CHD2-228ENST00000637613 OR4C46A6NHA9 309 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms