RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
CLN6-219ENST00000637329 GTSCR1Q86UQ5 136 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 KCNS1Q96KK3 526 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
CLN6-219ENST00000637329 TMSB15BA0A087X1C1 80 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 F2Z2F3 143 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 J3KRW8 73 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 M0R2Z0 102 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 IGKV3-20P01619 116 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 S100A8P05109 93 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 MED14OSP0DP75 135 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 ZNF124Q15973 351 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 DNLZQ5SXM8 178 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 PGLYRP4Q96LB8 373 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 CNFNQ9BYD5 112 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 C19orf73Q9NVV2 129 aa11.32□□□□□ -0.6
CLN6-219ENST00000637329 TMA7Q9Y2S6 64 aaKnown RBP11.32□□□□□ -0.6
CLN6-219ENST00000637329 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
CLN6-219ENST00000637329 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
CLN6-219ENST00000637329 ZNF324O75467 553 aaPredicted RBP11.31□□□□□ -0.6
CLN6-219ENST00000637329 CD7P09564 240 aa11.31□□□□□ -0.6
CLN6-219ENST00000637329 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
CLN6-219ENST00000637329 NUTF2P61970 127 aaKnown RBP11.31□□□□□ -0.6
CLN6-219ENST00000637329 RIGQ13278 110 aa11.31□□□□□ -0.6
CLN6-219ENST00000637329 MRPL54Q6P161 138 aaKnown RBP11.31□□□□□ -0.6
CLN6-219ENST00000637329 SNAI2O43623 268 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 INSP01308 110 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 OR5AL1P0C617 328 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 ASIPP42127 132 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 TMEM136Q6ZRR5 245 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 NAGKQ9UJ70 344 aa11.3□□□□□ -0.6
CLN6-219ENST00000637329 VWFP04275 2813 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 TRAV12-3A0A0B4J271 114 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 PHOX2AO14813 284 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 TRGC2P03986 189 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 ANXA2RQ3ZCQ2 193 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 PRR31Q5SQ13 230 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 LINC00467Q9BRT7 94 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 SSBP4Q9BWG4 385 aaPredicted RBP11.29□□□□□ -0.6
CLN6-219ENST00000637329 TRAPPC1Q9Y5R8 145 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 NOTCH1P46531 2555 aa11.29□□□□□ -0.6
CLN6-219ENST00000637329 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
CLN6-219ENST00000637329 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
CLN6-219ENST00000637329 CRXO43186 299 aaPredicted RBP11.28□□□□□ -0.6
CLN6-219ENST00000637329 SPINK4O60575 86 aa11.28□□□□□ -0.6
CLN6-219ENST00000637329 MORN3Q6PF18 240 aaPredicted RBP11.28□□□□□ -0.6
CLN6-219ENST00000637329 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
CLN6-219ENST00000637329 IGHV1OR15-1A0A075B7D0 117 aa11.27□□□□□ -0.61
CLN6-219ENST00000637329 IGLL1P15814 213 aa11.27□□□□□ -0.61
CLN6-219ENST00000637329 CACNG7P62955 275 aa11.27□□□□□ -0.61
CLN6-219ENST00000637329 Q6ZQT7 251 aa11.27□□□□□ -0.61
CLN6-219ENST00000637329 TMEM256Q8N2U0 113 aa11.27□□□□□ -0.61
CLN6-219ENST00000637329 FRZBQ92765 325 aa11.27□□□□□ -0.61
CLN6-219ENST00000637329 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
CLN6-219ENST00000637329 TRGV11A0A075B6L2 103 aa11.26□□□□□ -0.61
CLN6-219ENST00000637329 IGHV4-4A0A075B6R2 117 aa11.26□□□□□ -0.61
CLN6-219ENST00000637329 S100A4P26447 101 aaKnown RBP11.26□□□□□ -0.61
CLN6-219ENST00000637329 RAB4BP61018 213 aa11.26□□□□□ -0.61
CLN6-219ENST00000637329 FABP9Q0Z7S8 132 aa11.26□□□□□ -0.61
CLN6-219ENST00000637329 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
CLN6-219ENST00000637329 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
CLN6-219ENST00000637329 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
CLN6-219ENST00000637329 ZMAT5Q9UDW3 170 aaKnown RBP11.26□□□□□ -0.61
CLN6-219ENST00000637329 H3BVH4 76 aa11.25□□□□□ -0.61
CLN6-219ENST00000637329 CAMPP49913 170 aa11.25□□□□□ -0.61
CLN6-219ENST00000637329 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
CLN6-219ENST00000637329 SCRT2Q9NQ03 307 aa11.25□□□□□ -0.61
CLN6-219ENST00000637329 FRMD6-AS1P0C7T7 363 aa11.24□□□□□ -0.61
CLN6-219ENST00000637329 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
CLN6-219ENST00000637329 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
CLN6-219ENST00000637329 FXYD7P58549 80 aa11.24□□□□□ -0.61
CLN6-219ENST00000637329 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 NXPH4O95158 308 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 APCSP02743 223 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 RNASE3P12724 160 aaKnown RBP11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
CLN6-219ENST00000637329 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 NTF3P20783 257 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 239.2 ms