RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 DEFB131BA0A096LNP1 70 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 PGPEP1LA6NFU8 196 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 CBY3A6NI87 242 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 DAD1P61803 113 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 DAZ2Q13117 558 aaKnown RBP6.91□□□□□ -1.3
LINC00339-210ENST00000635675 ADIRFQ15847 76 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 SAPCD1Q5SSQ6 148 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 PRNTQ86SH4 94 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 NDFIP1Q9BT67 221 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 TP53TG3Q9ULZ0 132 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 KLF12Q9Y4X4 402 aa6.91□□□□□ -1.3
LINC00339-210ENST00000635675 TRAV21A0A0B4J279 112 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 SNURFLB1AK76 121 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 TMEM250H0YL14 139 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 DEFB130BP0DP73 79 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 DEFB130AP0DP74 79 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 ZNF80P51504 273 aaPredicted RBP6.9□□□□□ -1.31
LINC00339-210ENST00000635675 TDRG1Q3Y452 100 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 MUC21Q5SSG8 566 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 ATRAIDQ6UW56 229 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 NHLRC2Q8NBF2 726 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 TXNDC17Q9BRA2 123 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.31
LINC00339-210ENST00000635675 CARHSP1Q9Y2V2 147 aaKnown RBP6.9□□□□□ -1.31
LINC00339-210ENST00000635675 LCE6AA0A183 80 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 IGLL5B9A064 214 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 RPL35P42766 123 aaKnown RBP6.89□□□□□ -1.31
LINC00339-210ENST00000635675 UBE2G1P62253 170 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 CENPWQ5EE01 88 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 IBA57Q5T440 356 aaKnown RBP6.89□□□□□ -1.31
LINC00339-210ENST00000635675 FAM159AQ6UWV7 190 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 Q86TA4 180 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 C11orf52Q96A22 123 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 NAT8Q9UHE5 227 aa6.89□□□□□ -1.31
LINC00339-210ENST00000635675 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 GCGP01275 180 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 MGST1P10620 155 aaKnown RBP6.88□□□□□ -1.31
LINC00339-210ENST00000635675 TCL1AP56279 114 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 TCTAP57738 103 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 TMEM183BQ1AE95 376 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 C10orf91Q5T1B1 145 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 COX8CQ7Z4L0 72 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 SVBPQ8N300 66 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 CLRN3Q8NCR9 226 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 MDFICQ9P1T7 246 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 C11orf21Q9P2W6 132 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 ZFP30Q9Y2G7 519 aa6.88□□□□□ -1.31
LINC00339-210ENST00000635675 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
LINC00339-210ENST00000635675 IGHV4-4A0A075B6R2 117 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 GNRH2O43555 120 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 SPINK4O60575 86 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 LTAP01374 205 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 PFN1P07737 140 aaKnown RBP6.87□□□□□ -1.31
LINC00339-210ENST00000635675 GNG4P50150 75 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 RPL23P62829 140 aaKnown RBP6.87□□□□□ -1.31
LINC00339-210ENST00000635675 TMEM241Q24JQ0 296 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 Q6ZTI0 123 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 TMEM183AQ8IXX5 376 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 SDF2L1Q9HCN8 221 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 RPS10P5Q9NQ39 176 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 NAGKQ9UJ70 344 aa6.87□□□□□ -1.31
LINC00339-210ENST00000635675 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
LINC00339-210ENST00000635675 TRBV20OR9-2A0A075B6H5 130 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 TRGV11A0A075B6L2 103 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 IGHV3-16A0A0C4DH30 117 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 GAGE12BA1L429 117 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 GAGE7O76087 117 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 SNAPINO95295 136 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 ATP5G1P05496 136 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 S100A9P06702 114 aaKnown RBP6.86□□□□□ -1.31
LINC00339-210ENST00000635675 GAGE12FP0CL80 117 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 GAGE12GP0CL81 117 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 GAGE12IP0CL82 117 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 HTN3P15516 51 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 CRIP1P50238 77 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 ZNF415Q09FC8 603 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 OR5I1Q13606 314 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 LGALS9BQ3B8N2 356 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 PRR27Q6MZM9 219 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.86□□□□□ -1.31
LINC00339-210ENST00000635675 KCNS1Q96KK3 526 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 C18orf15Q96N68 181 aa6.86□□□□□ -1.31
LINC00339-210ENST00000635675 TRGV1A0A0A0MS02 117 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 FABP5P3A8MUU1 101 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 TYMSP04818 313 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 BAGE2Q86Y30 109 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 OCC1Q8TAD7 63 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 ZC2HC1AQ96GY0 325 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 SPXQ9BT56 116 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 NDUFAF3Q9BU61 184 aa6.85□□□□□ -1.31
LINC00339-210ENST00000635675 IGKV3D-20A0A0C4DH25 116 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms