RNA–Protein interactions for RNA: ENST00000631025.2

SOX2-OT-259, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 954 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-259ENST00000631025 Q9H8V8 135 aa9.48□□□□□ -0.89
SOX2-OT-259ENST00000631025 DNAH11Q96DT5 4516 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 IGLV2-11P01706 119 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 IQCF2Q8IXL9 164 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 C6orf223Q8N319 242 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 TMEM75Q8N9X5 138 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 SUN5Q8TC36 379 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 TREM1Q9NP99 234 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 AP5S1Q9NUS5 200 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 LENEPQ9Y5L5 61 aa9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
SOX2-OT-259ENST00000631025 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 H3BNG1 76 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 ARPC5O15511 151 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 PAX4O43316 350 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 TCRAP04437 139 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 TYMSP04818 313 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 CRYBA4P53673 196 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 FGF8P55075 233 aaPredicted RBP9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 FAM74A1Q5RGS3 127 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 FAM159AQ6UWV7 190 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 TMED6Q8WW62 240 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 CYTL1Q9NRR1 136 aa9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-259ENST00000631025 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 LOC100131303A0A0U1RQF7 123 aa9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 UBE2G2P60604 165 aa9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 SERF2P84101 59 aa9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 TDRG1Q3Y452 100 aa9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 C5orf17Q8NAS9 161 aa9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 ACTR3CQ9C0K3 210 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-259ENST00000631025 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
SOX2-OT-259ENST00000631025 CXorf1O96002 111 aa9.44□□□□□ -0.9
SOX2-OT-259ENST00000631025 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
SOX2-OT-259ENST00000631025 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
SOX2-OT-259ENST00000631025 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
SOX2-OT-259ENST00000631025 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
SOX2-OT-259ENST00000631025 HHLA3Q9XRX5 114 aa9.44□□□□□ -0.9
SOX2-OT-259ENST00000631025 BORCS7-ASMTA0A0B4J1R7 106 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 TRAV21A0A0B4J279 112 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 NXPH4O95158 308 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 GCGP01275 180 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 MBP02144 154 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 FHITP49789 147 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 DPPA3Q6W0C5 159 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 OR11H4Q8NGC9 324 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 RASL10AQ92737 203 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 EPDR1Q9UM22 224 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 TNFRSF18Q9Y5U5 241 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
SOX2-OT-259ENST00000631025 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
SOX2-OT-259ENST00000631025 MUC4Q99102 2169 aa9.42□□□□□ -0.9
SOX2-OT-259ENST00000631025 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
SOX2-OT-259ENST00000631025 FLI1Q01543 452 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-259ENST00000631025 ARL6IP6Q8N6S5 226 aa9.42□□□□□ -0.9
SOX2-OT-259ENST00000631025 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
SOX2-OT-259ENST00000631025 CTXND1A0A1B0GTU2 59 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 C9JCJ5 164 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 K7EQD1 137 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 GYPEP15421 78 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 LYPD5Q6UWN5 251 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 SPXQ9BT56 116 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
SOX2-OT-259ENST00000631025 M0R2P5 195 aa9.4□□□□□ -0.9
SOX2-OT-259ENST00000631025 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
SOX2-OT-259ENST00000631025 LINC00315P59091 139 aa9.4□□□□□ -0.9
SOX2-OT-259ENST00000631025 AKR1C8PQ5T2L2 129 aa9.4□□□□□ -0.9
SOX2-OT-259ENST00000631025 WFDC10BQ8IUB3 73 aa9.4□□□□□ -0.9
SOX2-OT-259ENST00000631025 RYR1P21817 5038 aa9.4□□□□□ -0.9
SOX2-OT-259ENST00000631025 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 TRAV4A0A0B4J268 109 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 A0A1B0GV50 99 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 MAP1LC3B2A6NCE7 125 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 FAM74A7A6NL05 159 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 KRTAP10-2P60368 255 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 Q86TA4 180 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 OR4C5Q8NGB2 326 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 NDFIP1Q9BT67 221 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 MAP1LC3BQ9GZQ8 125 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 ARL2-SNX15V9GYD0 113 aa9.39□□□□□ -0.91
SOX2-OT-259ENST00000631025 SERTM2A0A1B0GWG4 89 aa9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 PGPEP1LA6NFU8 196 aa9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 PEX7O00628 323 aa9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 SIVA1O15304 175 aa9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 IFNA7P01567 189 aa9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 PFN1P07737 140 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 RNASE3P12724 160 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 TTC32Q5I0X7 151 aa9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 Q6ZRN7 208 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 NEGR1Q7Z3B1 354 aa9.38□□□□□ -0.91
SOX2-OT-259ENST00000631025 KCNRGQ8N5I3 272 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms