RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 TRGV9Q99603 122 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 NXT2Q9NPJ8 142 aaKnown RBP1.98□□□□□ -2.09
CNOT1-223ENST00000628857 OSTCQ9NRP0 149 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 CYTL1Q9NRR1 136 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 TAS2R4Q9NYW5 299 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 GCC2Q8IWJ2 1684 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 NACAE9PAV3 2078 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 ALKQ9UM73 1620 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 TUBGCP6Q96RT7 1819 aa1.98□□□□□ -2.09
CNOT1-223ENST00000628857 MED1Q15648 1581 aaPredicted RBP1.98□□□□□ -2.09
CNOT1-223ENST00000628857 FMN2Q9NZ56 1722 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 ASXL1Q8IXJ9 1541 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 ALS2Q96Q42 1657 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 ATAD5Q96QE3 1844 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 IGHV7-81A0A0B4J1V7 117 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 IGLV2-8P01709 118 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 RNASE4P34096 147 aaKnown RBP1.97□□□□□ -2.09
CNOT1-223ENST00000628857 FGF12P61328 243 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 SNRPFP62306 86 aaKnown RBP1.97□□□□□ -2.09
CNOT1-223ENST00000628857 BLCAPP62952 87 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 BSPH1Q075Z2 132 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 INSL4Q14641 139 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 IGFBP7Q16270 282 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 CFAP126Q5VTH2 177 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 RPL7L1Q6DKI1 246 aaKnown RBP1.97□□□□□ -2.09
CNOT1-223ENST00000628857 CXCL17Q6UXB2 119 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 Q6ZQT7 251 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 MIR17HGQ75NE6 70 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 PDPNQ86YL7 162 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 TOMM5Q8N4H5 51 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 DAND5Q8N907 189 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 RNASE6Q93091 150 aaKnown RBP1.97□□□□□ -2.09
CNOT1-223ENST00000628857 OR8B2Q96RD0 313 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 MANBALQ9NQG1 85 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 CCL28Q9NRJ3 127 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 LY96Q9Y6Y9 160 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 NOTCH2Q04721 2471 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 ARHGEF5Q12774 1597 aa1.97□□□□□ -2.09
CNOT1-223ENST00000628857 COL4A4P53420 1690 aaPredicted RBP1.96□□□□□ -2.1
CNOT1-223ENST00000628857 STRCP1A6NGW2 1772 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 COL18A1P39060 1754 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 DSCAML1Q8TD84 2053 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 TRAV17A0A0B4J275 112 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 PIGBOS1A0A0B4J2F0 54 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 CRYM-AS1A6NIL9 109 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 J3QLW9 94 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 K7EM74 188 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 CCL16O15467 120 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 ZNF861PO60384 105 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 IGHV3-48P01763 117 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 BGLAPP02818 100 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 ASAH2BP0C7U1 165 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 CHTF8P0CG12 524 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 CD28P10747 220 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 PIPP12273 146 aaPredicted RBP1.96□□□□□ -2.1
CNOT1-223ENST00000628857 ZNF32P17041 273 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 CKS2P33552 79 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 UBE2G1P62253 170 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
CNOT1-223ENST00000628857 RSPO1Q2MKA7 263 aaPredicted RBP1.96□□□□□ -2.1
CNOT1-223ENST00000628857 NOXRED1Q6NXP6 359 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 SOSTDC1Q6X4U4 206 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 Q8N2B8 174 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 FAM216BQ8N7L0 139 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 Q8N8P6 123 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 Q8N9L7 120 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 ITLN2Q8WWU7 325 aaPredicted RBP1.96□□□□□ -2.1
CNOT1-223ENST00000628857 CLEC2BQ92478 149 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 AQP3Q92482 292 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 TRAPPC1Q9Y5R8 145 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 MAST1Q9Y2H9 1570 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 SLX4Q8IY92 1834 aa1.96□□□□□ -2.1
CNOT1-223ENST00000628857 DOCK11Q5JSL3 2073 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 LAMB2P55268 1798 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 COL14A1Q05707 1796 aaKnown RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 CICQ96RK0 1608 aaPredicted RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV6-21A0A0C4DH24 114 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV1-12A0A0C4DH73 117 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 F2Z2F3 143 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 C19orf84I3L1E1 186 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 LEPROTO15243 131 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV1D-12P01611 117 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV1-16P04430 117 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 ACYP1P07311 99 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 C3orf79P0CE67 100 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 SAA1P0DJI8 122 aaPredicted RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 CXCL8P10145 99 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 COX8AP10176 69 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 SMIM11AP58511 58 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 RBM3P98179 157 aaKnown RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 RPL18Q07020 188 aaKnown RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 EGFEM1PQ0D2K5 195 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 ZNF816Q0VGE8 651 aaPredicted RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 ZNF791Q3KP31 576 aaPredicted RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 PSMG4Q5JS54 123 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 S100A7L2Q5SY68 101 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.95□□□□□ -2.1
CNOT1-223ENST00000628857 TMEM170BQ5T4T1 132 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 FAM104BQ5XKR9 115 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 CEMP1Q6PRD7 247 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms