RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 IFNA5P01569 189 aa9.12□□□□□ -0.95
SOX2-OT-241ENST00000626948 IGLV2-11P01706 119 aa9.12□□□□□ -0.95
SOX2-OT-241ENST00000626948 SCGB1C1Q8TD33 95 aa9.12□□□□□ -0.95
SOX2-OT-241ENST00000626948 SRIP30626 198 aa9.11□□□□□ -0.95
SOX2-OT-241ENST00000626948 TAS2R45P59539 299 aa9.11□□□□□ -0.95
SOX2-OT-241ENST00000626948 Q5BKY6 102 aa9.11□□□□□ -0.95
SOX2-OT-241ENST00000626948 PQLC2Q6ZP29 291 aa9.11□□□□□ -0.95
SOX2-OT-241ENST00000626948 SUN5Q8TC36 379 aa9.11□□□□□ -0.95
SOX2-OT-241ENST00000626948 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
SOX2-OT-241ENST00000626948 M0R2P5 195 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 STAG3L2P0CL84 134 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 STAG3L3P0CL85 134 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 ARL14EPLP0DKL9 152 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 GATA1P15976 413 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 ACOT6Q3I5F7 207 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 TMEM75Q8N9X5 138 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 OR10G9Q8NGN4 311 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 OR10G7Q8NGN6 311 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 TREM1Q9NP99 234 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 PGPEP1Q9NXJ5 209 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
SOX2-OT-241ENST00000626948 TRAV21A0A0B4J279 112 aa9.09□□□□□ -0.95
SOX2-OT-241ENST00000626948 PET100P0DJ07 73 aa9.09□□□□□ -0.95
SOX2-OT-241ENST00000626948 ERVFC1-1P60608 527 aa9.09□□□□□ -0.95
SOX2-OT-241ENST00000626948 OR4C5Q8NGB2 326 aa9.09□□□□□ -0.95
SOX2-OT-241ENST00000626948 CMTM2Q8TAZ6 248 aa9.09□□□□□ -0.95
SOX2-OT-241ENST00000626948 MSRB1Q9NZV6 116 aa9.09□□□□□ -0.95
SOX2-OT-241ENST00000626948 GGTLC3B5MD39 225 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 ORM1P02763 201 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 TCRAP04437 139 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 OR2G3Q8NGZ4 309 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 RAB24Q969Q5 203 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 C9orf85Q96MD7 179 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 SH3BGRL3Q9H299 93 aa9.08□□□□□ -0.96
SOX2-OT-241ENST00000626948 A0A1W2PPV4 95 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 LRCOL1A6NCL2 159 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 C9JCJ5 164 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 RNASE3P12724 160 aaKnown RBP9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 ATP6V0CP27449 155 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 CFAP126Q5VTH2 177 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 Q6ZSN1 163 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 Q9UF83 564 aa9.07□□□□□ -0.96
SOX2-OT-241ENST00000626948 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 RS1O15537 224 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 CRYGDP07320 174 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 GCHFRP30047 84 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 DEFA1P59665 94 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 DEFA3P59666 94 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 HAMPP81172 84 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 FAM74A1Q5RGS3 127 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 CDPF1Q6NVV7 123 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 NFE4Q86UQ8 179 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 Q8N3U1 123 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 ASB13Q8WXK3 278 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 LINC00479Q96M42 142 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 AQP10Q96PS8 301 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 SDF2L1Q9HCN8 221 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
SOX2-OT-241ENST00000626948 IGHV3-73A0A0B4J1V6 119 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 GCGP01275 180 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 EVI2AP22794 236 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 TIRAPP58753 221 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 ZNF876PQ49A33 203 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 C5orf17Q8NAS9 161 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 PCNPQ8WW12 178 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 TXNDC17Q9BRA2 123 aa9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 PSMG3Q9BT73 122 aaPredicted RBP9.05□□□□□ -0.96
SOX2-OT-241ENST00000626948 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 IGKV3D-20A0A0C4DH25 116 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 RNF222A6NCQ9 220 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 EPM2AB3EWF7 344 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 K7EP13 123 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 SUMO1P63165 101 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 LINC01556Q5JQF7 62 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 ZNF506Q5JVG8 444 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 EPDR1Q9UM22 224 aa9.04□□□□□ -0.96
SOX2-OT-241ENST00000626948 IGHV3-38A0A0C4DH36 116 aa9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 FBLL1A6NHQ2 334 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 IBA57-AS1B1ANH7 110 aa9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 G3V3Q6 166 aa9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 PFN1P07737 140 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 FLI1Q01543 452 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 PRNTQ86SH4 94 aa9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 NHLRC2Q8NBF2 726 aa9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 JPT2Q9H910 190 aa9.03□□□□□ -0.96
SOX2-OT-241ENST00000626948 TRAV34A0A0B4J273 112 aa9.02□□□□□ -0.97
SOX2-OT-241ENST00000626948 SERTM2A0A1B0GWG4 89 aa9.02□□□□□ -0.97
SOX2-OT-241ENST00000626948 TRBV6-4A0A1B0GX49 114 aa9.02□□□□□ -0.97
SOX2-OT-241ENST00000626948 EREGO14944 169 aa9.02□□□□□ -0.97
SOX2-OT-241ENST00000626948 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-241ENST00000626948 WFDC2Q14508 124 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms