RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 EVI2AP22794 236 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 GCSHP23434 173 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 RPL12P30050 165 aaKnown RBP6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 ZNF80P51504 273 aaPredicted RBP6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 UBE2L3P68036 154 aaKnown RBP6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 ARL6IP6Q8N6S5 226 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 S100ZQ8WXG8 99 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 SGK494Q96LW2 274 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 TRGV11A0A075B6L2 103 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 A6NHS1 94 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 IBA57-AS1B1ANH7 110 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 HMGB3O15347 200 aaKnown RBP6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 IFNA5P01569 189 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 CRYGDP07320 174 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 TIRAPP58753 221 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 Q5VSD8 79 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 GOLT1AQ6ZVE7 132 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 SLC25A29Q8N8R3 303 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 ENKURQ8TC29 256 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 SCGB1C1Q8TD33 95 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 TREM1Q9NP99 234 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 KCNIP2Q9NS61 270 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 PTTG2Q9NZH5 202 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 FAM30AQ9NZY2 134 aa6.1□□□□□ -1.43
PCDHB9-202ENST00000623266 TRAV21A0A0B4J279 112 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 IGHV3-38A0A0C4DH36 116 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 F6UZH7 168 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 RS1O15537 224 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 TAS2R45P59539 299 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 RAB2AP61019 212 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 GNG5P63218 68 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 HAMPP81172 84 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 KHDC3LQ587J8 217 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 CFAP126Q5VTH2 177 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 SUN5Q8TC36 379 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 TXNDC17Q9BRA2 123 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 Q9UF83 564 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 NAGKQ9UJ70 344 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 RPH3ALQ9UNE2 315 aa6.09□□□□□ -1.43
PCDHB9-202ENST00000623266 C9JCJ5 164 aa6.08□□□□□ -1.44
PCDHB9-202ENST00000623266 IGLV2-11P01706 119 aa6.08□□□□□ -1.44
PCDHB9-202ENST00000623266 ZNF876PQ49A33 203 aa6.08□□□□□ -1.44
PCDHB9-202ENST00000623266 PQLC2Q6ZP29 291 aa6.08□□□□□ -1.44
PCDHB9-202ENST00000623266 Q6ZSN1 163 aa6.08□□□□□ -1.44
PCDHB9-202ENST00000623266 OR10G9Q8NGN4 311 aa6.08□□□□□ -1.44
PCDHB9-202ENST00000623266 OR10G7Q8NGN6 311 aa6.08□□□□□ -1.44
PCDHB9-202ENST00000623266 IGHV3-73A0A0B4J1V6 119 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 TRBV6-4A0A1B0GX49 114 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 A0A1W2PPV4 95 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 STAG3L2P0CL84 134 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 STAG3L3P0CL85 134 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 RNASE3P12724 160 aaKnown RBP6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 ACOT6Q3I5F7 207 aaPredicted RBP6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 LINC01556Q5JQF7 62 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 FAM74A1Q5RGS3 127 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 SH2D6Q7Z4S9 175 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 TMEM75Q8N9X5 138 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 NHLRC2Q8NBF2 726 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 CMTM2Q8TAZ6 248 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 PCNPQ8WW12 178 aaKnown RBP6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 ASB13Q8WXK3 278 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 FRZBQ92765 325 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 KCNS1Q96KK3 526 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 C9orf85Q96MD7 179 aa6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
PCDHB9-202ENST00000623266 FBLL1A6NHQ2 334 aaKnown RBP6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 SSNA1O43805 119 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 IGHV3-30P01768 117 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 TCRAP04437 139 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 PFN1P07737 140 aaKnown RBP6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 IGHV3-30-3P0DP02 117 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 IGHV3-30-5P0DP03 117 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 WFDC2Q14508 124 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 Q5BKY6 102 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 DMRTA1Q5VZB9 504 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 Q8N3U1 123 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 C10orf126Q8N4M7 172 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 RAB24Q969Q5 203 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 PTH2Q96A98 100 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 LINC00479Q96M42 142 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 PSG8Q9UQ74 426 aa6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
PCDHB9-202ENST00000623266 IGLV5-52A0A0A0MRZ9 124 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 IGKV3D-20A0A0C4DH25 116 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 TAAR5O14804 337 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 CIDEAO60543 219 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 GCGP01275 180 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 ARL14EPLP0DKL9 152 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 OR10J3Q5JRS4 329 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 ZNF506Q5JVG8 444 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 LELP1Q5T871 98 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 Q8N814 137 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 OR2G3Q8NGZ4 309 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 GTSF1LQ9H1H1 148 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 JPT2Q9H910 190 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 Q9HAA7 133 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms