RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 GRIFINA4D1Z8 144 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 HIGD1CA8MV81 97 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 G3V4G9 280 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 ZNF324O75467 553 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-212ENST00000621783 KRTAP10-11P60412 298 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 ANXA2RQ3ZCQ2 193 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 SAMD5Q5TGI4 173 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 NUP35Q8NFH5 326 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 PYGO2Q9BRQ0 406 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 NAT8BQ9UHF3 227 aa7.81□□□□□ -1.16
CPNE3-212ENST00000621783 AGRNO00468 2067 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 FAM231BA6NCW3 169 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 IGLC6P0CF74 106 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 NUTF2P61970 127 aaKnown RBP7.8□□□□□ -1.16
CPNE3-212ENST00000621783 MORN3Q6PF18 240 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-212ENST00000621783 ZNF575Q86XF7 245 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 FER1L6-AS1Q8NA97 138 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 BTF3L4Q96K17 158 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 FAM210BQ96KR6 192 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 XCL2Q9UBD3 114 aa7.8□□□□□ -1.16
CPNE3-212ENST00000621783 IGHV1OR15-1A0A075B7D0 117 aa7.79□□□□□ -1.16
CPNE3-212ENST00000621783 SPINK4O60575 86 aa7.79□□□□□ -1.16
CPNE3-212ENST00000621783 TYMSP04818 313 aa7.79□□□□□ -1.16
CPNE3-212ENST00000621783 GIG44P09565 113 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-212ENST00000621783 CTRLP40313 264 aa7.79□□□□□ -1.16
CPNE3-212ENST00000621783 FAM159AQ6UWV7 190 aa7.79□□□□□ -1.16
CPNE3-212ENST00000621783 C20orf144Q9BQM9 153 aa7.79□□□□□ -1.16
CPNE3-212ENST00000621783 TPPP3Q9BW30 176 aa7.79□□□□□ -1.16
CPNE3-212ENST00000621783 H3BVH4 76 aa7.78□□□□□ -1.16
CPNE3-212ENST00000621783 RAB5AP20339 215 aa7.78□□□□□ -1.16
CPNE3-212ENST00000621783 ASIPP42127 132 aa7.78□□□□□ -1.16
CPNE3-212ENST00000621783 FOXA3P55318 350 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-212ENST00000621783 TDRG1Q3Y452 100 aa7.78□□□□□ -1.16
CPNE3-212ENST00000621783 MRPL54Q6P161 138 aaKnown RBP7.78□□□□□ -1.16
CPNE3-212ENST00000621783 KCNS1Q96KK3 526 aa7.78□□□□□ -1.16
CPNE3-212ENST00000621783 ZMAT5Q9UDW3 170 aaKnown RBP7.78□□□□□ -1.16
CPNE3-212ENST00000621783 LOC102724200A0A096LPH7 203 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-212ENST00000621783 A0A1B0GXF2 115 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 GNRH2O43555 120 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 ARMS2P0C7Q2 107 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 DNLZQ5SXM8 178 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 LYZL1Q6UWQ5 148 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 C1orf158Q8N1D5 194 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 C1QTNF4Q9BXJ3 329 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 TP53TG3Q9ULZ0 132 aa7.77□□□□□ -1.17
CPNE3-212ENST00000621783 TRGV11A0A075B6L2 103 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 IGHV3-16A0A0C4DH30 117 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 MUC21A0A0G2JKD1 596 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 MUC21A0A140T8X8 626 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 A0A1B0GUT8 65 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 CBY3A6NI87 242 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 SNAI2O43623 268 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 OR5AL1P0C617 328 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 FRMD6-AS1P0C7T7 363 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 MED14OSP0DP75 135 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 RNASE3P12724 160 aaKnown RBP7.76□□□□□ -1.17
CPNE3-212ENST00000621783 S100A4P26447 101 aaKnown RBP7.76□□□□□ -1.17
CPNE3-212ENST00000621783 KRTAP21-3Q3LHN1 58 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 TMEM256Q8N2U0 113 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 BORCS7Q96B45 105 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 LINC01587Q99440 93 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 LINC00467Q9BRT7 94 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 SSBP4Q9BWG4 385 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-212ENST00000621783 CSTL1Q9H114 145 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 GOLT1BQ9Y3E0 138 aa7.76□□□□□ -1.17
CPNE3-212ENST00000621783 TIMM8BQ9Y5J9 83 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-212ENST00000621783 VWFP04275 2813 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 SORL1Q92673 2214 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 IGHV3OR16-12A0A075B7B8 117 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 F2Z2F3 143 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 IGHV4-30-4P0DP06 118 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 RPS10P46783 165 aaKnown RBP7.75□□□□□ -1.17
CPNE3-212ENST00000621783 APOC4P55056 127 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 HBBP68871 147 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 RIGQ13278 110 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 CSNK1G2-AS1Q8NCQ2 148 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 OR10AG1Q8NH19 301 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 C9orf85Q96MD7 179 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 TMEM208Q9BTX3 173 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 CNFNQ9BYD5 112 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 SCRT2Q9NQ03 307 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 ANK2Q01484 3957 aa7.75□□□□□ -1.17
CPNE3-212ENST00000621783 KIR2DL5BA0A0G2JN68 375 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 KIR2DL5BA0A0G2JPC4 375 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 SNURFLB1AK76 121 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 PRM2P04554 102 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 HTN1P15515 57 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 CAMPP49913 170 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 ZNF415Q09FC8 603 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 C4orf48Q5BLP8 95 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 RASL11AQ6T310 242 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 TMEM136Q6ZRR5 245 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 KIR2DL5AQ8N109 375 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 KIR2DL5BQ8NHK3 375 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 MDFICQ9P1T7 246 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 STAB1Q9NY15 2570 aa7.74□□□□□ -1.17
CPNE3-212ENST00000621783 SPRY2O43597 315 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 SSTP61278 116 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms