RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 C1orf196B1AJZ1 125 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 C9JCJ5 164 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 G3V318 75 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 DNASE2O00115 360 aaPredicted RBP3.47□□□□□ -1.85
VPS29-212ENST00000621131 CD5LO43866 347 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 ZNF253O75346 499 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 EIF3GO75821 320 aaKnown RBP eCLIP3.47□□□□□ -1.85
VPS29-212ENST00000621131 IGKV1-17P01599 117 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 IGHV3-23P01764 117 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 PRB2P02812 416 aaPredicted RBP3.47□□□□□ -1.85
VPS29-212ENST00000621131 CRYBA1P05813 215 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 NBEAP1P0C6P0 100 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 PYYP10082 97 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 GALR1P47211 349 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 TAS2R60P59551 318 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 RAB5BP61020 215 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 PDE6HQ13956 83 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 KLK9Q2XQG4 91 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 LBHQ53QV2 105 aaPredicted RBP3.47□□□□□ -1.85
VPS29-212ENST00000621131 ATRAIDQ6UW56 229 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 CLEC19AQ6UXS0 136 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 PATE2Q6UY27 113 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 Q71RC1 249 aaPredicted RBP3.47□□□□□ -1.85
VPS29-212ENST00000621131 OR8I2Q8N0Y5 310 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 ZNF491Q8N8L2 437 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 C5orf17Q8NAS9 161 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 SMIM12Q96EX1 92 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 FMC1Q96HJ9 113 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 OTORQ9NRC9 128 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 YAE1D1Q9NRH1 226 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 TMEM242Q9NWH2 141 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 MRPL36Q9P0J6 103 aaKnown RBP3.47□□□□□ -1.85
VPS29-212ENST00000621131 MRPL27Q9P0M9 148 aaKnown RBP3.47□□□□□ -1.85
VPS29-212ENST00000621131 MLXQ9UH92 298 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 KLK9Q9UKQ9 250 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 RPH3ALQ9UNE2 315 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 YTHDF2Q9Y5A9 579 aaKnown RBP3.47□□□□□ -1.85
VPS29-212ENST00000621131 S4R3C0 116 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 CR1P17927 2039 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 RYR1P21817 5038 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 PGPA6NDG6 321 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 ZNF98A6NK75 572 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 NDUFA4O00483 81 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 PEX7O00628 323 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 MGST1P10620 155 aaKnown RBP3.46□□□□□ -1.86
VPS29-212ENST00000621131 NPPCP23582 126 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 CRYBB3P26998 211 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 RANP62826 216 aaKnown RBP3.46□□□□□ -1.86
VPS29-212ENST00000621131 RPL23P62829 140 aaKnown RBP3.46□□□□□ -1.86
VPS29-212ENST00000621131 C1orf194Q5T5A4 169 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 PIFOQ8TCI5 191 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 FXYD5Q96DB9 178 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 FAM167A-AS1Q96KT0 104 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 SLC50A1Q9BRV3 221 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 ATG101Q9BSB4 218 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 Q9H3A6 140 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 Q9UF83 564 aa3.46□□□□□ -1.86
VPS29-212ENST00000621131 ABCA1O95477 2261 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 TRBV19A0A075B6N1 114 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 TRAV9-1A0A075B6T8 112 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.45□□□□□ -1.86
VPS29-212ENST00000621131 GGTLC3B5MD39 225 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 PPP5D1E7EU14 171 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 UBE2CO00762 179 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 GGCTO75223 188 aaKnown RBP3.45□□□□□ -1.86
VPS29-212ENST00000621131 IGHG4P01861 327 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 S100A6P06703 90 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 CTSGP08311 255 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 RAB5AP20339 215 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 RPL35P42766 123 aaKnown RBP3.45□□□□□ -1.86
VPS29-212ENST00000621131 FLI1Q01543 452 aaPredicted RBP3.45□□□□□ -1.86
VPS29-212ENST00000621131 TMEM183BQ1AE95 376 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 RPEL1Q2QD12 228 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 COX19Q49B96 90 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 CENPWQ5EE01 88 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 SAMD13Q5VXD3 122 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 LINC01551Q86U37 167 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 ARL6IP6Q8N6S5 226 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 SIGLECL1Q8N7X8 197 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 OR4X2Q8NGF9 303 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 ZNF418Q8TF45 676 aaPredicted RBP3.45□□□□□ -1.86
VPS29-212ENST00000621131 ISOC2Q96AB3 205 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 SFRP2Q96HF1 295 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 RCHY1Q96PM5 261 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 IMMP2LQ96T52 175 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 NDFIP1Q9BT67 221 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 LINC00527Q9UJ94 153 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 EPDR1Q9UM22 224 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 UFC1Q9Y3C8 167 aa3.45□□□□□ -1.86
VPS29-212ENST00000621131 VWFP04275 2813 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 A0A087X0K7 114 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 ZNF705GA8MUZ8 300 aaPredicted RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 GATCO43716 136 aaKnown RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 TCRAP04437 139 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 CT45A10P0DMU9 189 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 RPS10P46783 165 aaKnown RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 BLCAPP62952 87 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 USF2Q15853 346 aaPredicted RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 IBA57Q5T440 356 aaKnown RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 TOMM20LQ6UXN7 152 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms