RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 C11orf21Q9P2W6 132 aa9.68□□□□□ -0.86
MUC1-229ENST00000620770 TRGV11A0A075B6L2 103 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 CXorf65A6NEN9 183 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 ORM1P02763 201 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 NANOS2P60321 138 aaKnown RBP9.67□□□□□ -0.86
MUC1-229ENST00000620770 ZNF415Q09FC8 603 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 ZNF493Q6ZR52 646 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 C11orf45Q8TAV5 145 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 SMIM7Q9BQ49 75 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 NOP10Q9NPE3 64 aaKnown RBP9.67□□□□□ -0.86
MUC1-229ENST00000620770 GSN-AS1Q9NRJ2 163 aa9.67□□□□□ -0.86
MUC1-229ENST00000620770 TMSB15BA0A087X1C1 80 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 GNRH2O43555 120 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 IGLV2-8P01709 118 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 TYMSP04818 313 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 COX8CQ7Z4L0 72 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 IL17DQ8TAD2 202 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 DKK2Q9UBU2 259 aa9.66□□□□□ -0.86
MUC1-229ENST00000620770 TIMM8BQ9Y5J9 83 aaPredicted RBP9.66□□□□□ -0.86
MUC1-229ENST00000620770 LCE6AA0A183 80 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 ZNF727A8MUV8 499 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 B4DEV8 164 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 C9JCJ5 164 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 OR5I1Q13606 314 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 C11orf72Q8NBR9 251 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 MDFICQ9P1T7 246 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 SACSQ9NZJ4 4579 aa9.65□□□□□ -0.86
MUC1-229ENST00000620770 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 IGHV3-16A0A0C4DH30 117 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 NDUFS6O75380 124 aaKnown RBP9.64□□□□□ -0.87
MUC1-229ENST00000620770 DEFB130BP0DP73 79 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 DEFB130AP0DP74 79 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 TCL1AP56279 114 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 RPL19P84098 196 aaKnown RBP9.64□□□□□ -0.87
MUC1-229ENST00000620770 TDRG1Q3Y452 100 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 RYR2Q92736 4967 aa9.64□□□□□ -0.87
MUC1-229ENST00000620770 TRGV1A0A0A0MS02 117 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 GAGE12BA1L429 117 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 LYRM9A8MSI8 78 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 GAGE7O76087 117 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 GAGE12FP0CL80 117 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 GAGE12GP0CL81 117 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 GAGE12IP0CL82 117 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 DAD1P61803 113 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 C12orf74Q32Q52 190 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 IBA57Q5T440 356 aaKnown RBP9.63□□□□□ -0.87
MUC1-229ENST00000620770 COMMD7Q86VX2 200 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 OCC1Q8TAD7 63 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 DAZAP1Q96EP5 407 aaKnown RBP9.63□□□□□ -0.87
MUC1-229ENST00000620770 SMIM12Q96EX1 92 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
MUC1-229ENST00000620770 TENM2Q9NT68 2774 aa9.63□□□□□ -0.87
MUC1-229ENST00000620770 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 KRBOX1C9JBD0 128 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 K7EN84 100 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 HTN3P15516 51 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 S100A4P26447 101 aaKnown RBP9.62□□□□□ -0.87
MUC1-229ENST00000620770 ASIPP42127 132 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 SOHLH1Q5JUK2 328 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 Q6ZTC4 211 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 Q6ZTI0 123 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 SMDT1Q9H4I9 107 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 STARD9Q9P2P6 4700 aa9.62□□□□□ -0.87
MUC1-229ENST00000620770 H3BVH4 76 aa9.61□□□□□ -0.87
MUC1-229ENST00000620770 P01737 135 aa9.61□□□□□ -0.87
MUC1-229ENST00000620770 SFTA3P0C7M3 94 aa9.61□□□□□ -0.87
MUC1-229ENST00000620770 DAZ2Q13117 558 aaKnown RBP9.61□□□□□ -0.87
MUC1-229ENST00000620770 CSMD3Q7Z407 3707 aa9.6□□□□□ -0.87
MUC1-229ENST00000620770 FAM74A3Q4VXF1 159 aa9.6□□□□□ -0.87
MUC1-229ENST00000620770 LINC01551Q86U37 167 aa9.6□□□□□ -0.87
MUC1-229ENST00000620770 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
MUC1-229ENST00000620770 RNASE7Q9H1E1 156 aaKnown RBP9.6□□□□□ -0.87
MUC1-229ENST00000620770 TRGV2A0A075B6R0 118 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 SPINK4O60575 86 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 ADIRFQ15847 76 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 TMEM241Q24JQ0 296 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
MUC1-229ENST00000620770 SPXQ9BT56 116 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 NAT8Q9UHE5 227 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 LY96Q9Y6Y9 160 aa9.59□□□□□ -0.87
MUC1-229ENST00000620770 M0R2P5 195 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 IGHV3-53P01767 116 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 ARMS2P0C7Q2 107 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 GZMBP10144 247 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 RNASE3P12724 160 aaKnown RBP9.58□□□□□ -0.88
MUC1-229ENST00000620770 ERVFC1-1P60608 527 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 C9orf85Q96MD7 179 aa9.58□□□□□ -0.88
MUC1-229ENST00000620770 TPPP3Q9BW30 176 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms