RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 TDRG1Q3Y452 100 aa16.3■□□□□ 0.2
CBWD3-213ENST00000618217 HTN1P15515 57 aa16.3■□□□□ 0.2
CBWD3-213ENST00000618217 MUC21Q5SSG8 566 aa16.3■□□□□ 0.2
CBWD3-213ENST00000618217 C11orf68Q9H3H3 251 aaKnown RBP16.3■□□□□ 0.2
CBWD3-213ENST00000618217 PLAC8L1A1L4L8 177 aa16.29■□□□□ 0.2
CBWD3-213ENST00000618217 DEFB4AO15263 64 aa16.29■□□□□ 0.2
CBWD3-213ENST00000618217 ANXA2RQ3ZCQ2 193 aa16.29■□□□□ 0.2
CBWD3-213ENST00000618217 FAM74A3Q4VXF1 159 aa16.29■□□□□ 0.2
CBWD3-213ENST00000618217 FAM162BQ5T6X4 162 aa16.29■□□□□ 0.2
CBWD3-213ENST00000618217 RNASE8Q8TDE3 154 aaKnown RBP16.29■□□□□ 0.2
CBWD3-213ENST00000618217 TP53TG3Q9ULZ0 132 aa16.29■□□□□ 0.2
CBWD3-213ENST00000618217 A0A0J9YWU9 116 aa16.28■□□□□ 0.2
CBWD3-213ENST00000618217 SH2D1AO60880 128 aa16.28■□□□□ 0.2
CBWD3-213ENST00000618217 OCC1Q8TAD7 63 aa16.28■□□□□ 0.2
CBWD3-213ENST00000618217 FAM159AQ6UWV7 190 aa16.27■□□□□ 0.2
CBWD3-213ENST00000618217 TMEM263Q8WUH6 116 aaKnown RBP16.27■□□□□ 0.2
CBWD3-213ENST00000618217 EDA2RQ9HAV5 297 aa16.27■□□□□ 0.2
CBWD3-213ENST00000618217 ZNF493Q6ZR52 646 aa16.27■□□□□ 0.19
CBWD3-213ENST00000618217 NAT8Q9UHE5 227 aa16.27■□□□□ 0.19
CBWD3-213ENST00000618217 CBY3A6NI87 242 aa16.26■□□□□ 0.19
CBWD3-213ENST00000618217 ZNF575Q86XF7 245 aa16.26■□□□□ 0.19
CBWD3-213ENST00000618217 C11orf72Q8NBR9 251 aa16.26■□□□□ 0.19
CBWD3-213ENST00000618217 NAGKQ9UJ70 344 aa16.26■□□□□ 0.19
CBWD3-213ENST00000618217 IGKV3D-20A0A0C4DH25 116 aa16.25■□□□□ 0.19
CBWD3-213ENST00000618217 K7EN84 100 aa16.25■□□□□ 0.19
CBWD3-213ENST00000618217 TMEM241Q24JQ0 296 aa16.25■□□□□ 0.19
CBWD3-213ENST00000618217 C16orf74Q96GX8 76 aa16.25■□□□□ 0.19
CBWD3-213ENST00000618217 SDF2L1Q9HCN8 221 aa16.25■□□□□ 0.19
CBWD3-213ENST00000618217 LY96Q9Y6Y9 160 aa16.25■□□□□ 0.19
CBWD3-213ENST00000618217 TMEM189A5PLL7 270 aa16.24■□□□□ 0.19
CBWD3-213ENST00000618217 GNRH2O43555 120 aa16.24■□□□□ 0.19
CBWD3-213ENST00000618217 MGST1P10620 155 aaKnown RBP16.24■□□□□ 0.19
CBWD3-213ENST00000618217 PNRC1Q12796 327 aaPredicted RBP16.24■□□□□ 0.19
CBWD3-213ENST00000618217 KCNS1Q96KK3 526 aa16.24■□□□□ 0.19
CBWD3-213ENST00000618217 RPS10P5Q9NQ39 176 aa16.24■□□□□ 0.19
CBWD3-213ENST00000618217 RHEBQ15382 184 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 PRR27Q6MZM9 219 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 C7orf77A4D0Y5 90 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 C19orf71A6NCJ1 209 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 TYMSP04818 313 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 OR5I1Q13606 314 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 ADIRFQ15847 76 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 LINC01559Q495D7 138 aa16.23■□□□□ 0.19
CBWD3-213ENST00000618217 ORM1P02763 201 aa16.22■□□□□ 0.19
CBWD3-213ENST00000618217 EMP1P54849 157 aa16.22■□□□□ 0.19
CBWD3-213ENST00000618217 IBA57Q5T440 356 aaKnown RBP16.22■□□□□ 0.19
CBWD3-213ENST00000618217 LINC01551Q86U37 167 aa16.22■□□□□ 0.19
CBWD3-213ENST00000618217 IL17DQ8TAD2 202 aa16.22■□□□□ 0.19
CBWD3-213ENST00000618217 GSN-AS1Q9NRJ2 163 aa16.22■□□□□ 0.19
CBWD3-213ENST00000618217 MDFICQ9P1T7 246 aa16.22■□□□□ 0.19
CBWD3-213ENST00000618217 RPL23P62829 140 aaKnown RBP16.21■□□□□ 0.19
CBWD3-213ENST00000618217 BIN3Q9NQY0 253 aa16.21■□□□□ 0.19
CBWD3-213ENST00000618217 TRGV11A0A075B6L2 103 aa16.2■□□□□ 0.18
CBWD3-213ENST00000618217 IGHV3-16A0A0C4DH30 117 aa16.2■□□□□ 0.18
CBWD3-213ENST00000618217 DKK2Q9UBU2 259 aa16.2■□□□□ 0.18
CBWD3-213ENST00000618217 CELA1Q9UNI1 258 aa16.2■□□□□ 0.18
CBWD3-213ENST00000618217 B4DEV8 164 aa16.19■□□□□ 0.18
CBWD3-213ENST00000618217 TCL1AP56279 114 aa16.19■□□□□ 0.18
CBWD3-213ENST00000618217 TMEM88Q6PEY1 159 aa16.19■□□□□ 0.18
CBWD3-213ENST00000618217 TIMM8BQ9Y5J9 83 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-213ENST00000618217 DAZ2Q13117 558 aaKnown RBP16.19■□□□□ 0.18
CBWD3-213ENST00000618217 CBLN2Q8IUK8 224 aa16.19■□□□□ 0.18
CBWD3-213ENST00000618217 DNLZQ5SXM8 178 aa16.18■□□□□ 0.18
CBWD3-213ENST00000618217 FAM222AQ5U5X8 452 aa16.18■□□□□ 0.18
CBWD3-213ENST00000618217 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-213ENST00000618217 NOP10Q9NPE3 64 aaKnown RBP16.18■□□□□ 0.18
CBWD3-213ENST00000618217 RPL19P84098 196 aaKnown RBP16.17■□□□□ 0.18
CBWD3-213ENST00000618217 ZNF415Q09FC8 603 aa16.17■□□□□ 0.18
CBWD3-213ENST00000618217 NUDT10Q8NFP7 164 aa16.17■□□□□ 0.18
CBWD3-213ENST00000618217 NUDT11Q96G61 164 aa16.17■□□□□ 0.18
CBWD3-213ENST00000618217 MUC4Q99102 2169 aa16.17■□□□□ 0.18
CBWD3-213ENST00000618217 SNURFLB1AK76 121 aa16.16■□□□□ 0.18
CBWD3-213ENST00000618217 SPART-AS1P0CW21 52 aa16.16■□□□□ 0.18
CBWD3-213ENST00000618217 DAZAP1Q96EP5 407 aaKnown RBP16.16■□□□□ 0.18
CBWD3-213ENST00000618217 RNASE7Q9H1E1 156 aaKnown RBP16.16■□□□□ 0.18
CBWD3-213ENST00000618217 LYRM9A8MSI8 78 aa16.16■□□□□ 0.18
CBWD3-213ENST00000618217 RNASE3P12724 160 aaKnown RBP16.16■□□□□ 0.18
CBWD3-213ENST00000618217 TMSB15BA0A087X1C1 80 aa16.15■□□□□ 0.18
CBWD3-213ENST00000618217 CXorf65A6NEN9 183 aa16.15■□□□□ 0.18
CBWD3-213ENST00000618217 FAM231DQ6ZW35 169 aa16.15■□□□□ 0.18
CBWD3-213ENST00000618217 LINC00612Q8N6U2 182 aa16.15■□□□□ 0.18
CBWD3-213ENST00000618217 C9orf85Q96MD7 179 aa16.15■□□□□ 0.18
CBWD3-213ENST00000618217 SMCO4Q9NRQ5 59 aa16.15■□□□□ 0.18
CBWD3-213ENST00000618217 A0A087WWC5 75 aa16.14■□□□□ 0.17
CBWD3-213ENST00000618217 GRIFINA4D1Z8 144 aa16.14■□□□□ 0.17
CBWD3-213ENST00000618217 P01737 135 aa16.14■□□□□ 0.17
CBWD3-213ENST00000618217 CXCL1P09341 107 aa16.14■□□□□ 0.17
CBWD3-213ENST00000618217 RNF212Q495C1 297 aa16.14■□□□□ 0.17
CBWD3-213ENST00000618217 C11orf45Q8TAV5 145 aa16.14■□□□□ 0.17
CBWD3-213ENST00000618217 SPXQ9BT56 116 aa16.14■□□□□ 0.17
CBWD3-213ENST00000618217 SPINK4O60575 86 aa16.13■□□□□ 0.17
CBWD3-213ENST00000618217 ASIPP42127 132 aa16.13■□□□□ 0.17
CBWD3-213ENST00000618217 C12orf74Q32Q52 190 aa16.13■□□□□ 0.17
CBWD3-213ENST00000618217 ISOC2Q96AB3 205 aa16.13■□□□□ 0.17
CBWD3-213ENST00000618217 TEX48A0A1B0GUV7 120 aa16.12■□□□□ 0.17
CBWD3-213ENST00000618217 OR2D3Q8NGH3 330 aa16.12■□□□□ 0.17
CBWD3-213ENST00000618217 IL36BQ9NZH7 164 aa16.12■□□□□ 0.17
CBWD3-213ENST00000618217 MT-ND4LP03901 98 aa16.12■□□□□ 0.17
CBWD3-213ENST00000618217 NANOS2P60321 138 aaKnown RBP16.12■□□□□ 0.17
CBWD3-213ENST00000618217 LGALS9BQ3B8N2 356 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms