RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 KCNS1Q96KK3 526 aa11.22□□□□□ -0.61
PCDHGC3-204ENST00000617222 TENM3Q9P273 2699 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 IGKV3D-20A0A0C4DH25 116 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 TMEM189A5PLL7 270 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 K7EN84 100 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 M0R036 132 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 SFTA3P0C7M3 94 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 TMEM241Q24JQ0 296 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 UQCC3Q6UW78 93 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 C11orf68Q9H3H3 251 aaKnown RBP11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 SDF2L1Q9HCN8 221 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 BIN3Q9NQY0 253 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.61
PCDHGC3-204ENST00000617222 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
PCDHGC3-204ENST00000617222 PLAC8L1A1L4L8 177 aa11.2□□□□□ -0.62
PCDHGC3-204ENST00000617222 TYMSP04818 313 aa11.2□□□□□ -0.62
PCDHGC3-204ENST00000617222 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
PCDHGC3-204ENST00000617222 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
PCDHGC3-204ENST00000617222 LY96Q9Y6Y9 160 aa11.2□□□□□ -0.62
PCDHGC3-204ENST00000617222 TMSB15BA0A087X1C1 80 aa11.19□□□□□ -0.62
PCDHGC3-204ENST00000617222 B4DEV8 164 aa11.19□□□□□ -0.62
PCDHGC3-204ENST00000617222 KRBOX1C9JBD0 128 aa11.19□□□□□ -0.62
PCDHGC3-204ENST00000617222 C11orf72Q8NBR9 251 aa11.19□□□□□ -0.62
PCDHGC3-204ENST00000617222 EDA2RQ9HAV5 297 aa11.19□□□□□ -0.62
PCDHGC3-204ENST00000617222 NAT8Q9UHE5 227 aa11.19□□□□□ -0.62
PCDHGC3-204ENST00000617222 IGHV3-16A0A0C4DH30 117 aa11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 C19orf71A6NCJ1 209 aa11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 SNURFLB1AK76 121 aa11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 RPL19P84098 196 aaKnown RBP11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 ZNF415Q09FC8 603 aa11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 LINC01551Q86U37 167 aa11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 NOP10Q9NPE3 64 aaKnown RBP11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
PCDHGC3-204ENST00000617222 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 TCL1AP56279 114 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 RPL23P62829 140 aaKnown RBP11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 FAM222AQ5U5X8 452 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 RNASE7Q9H1E1 156 aaKnown RBP11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 DKK2Q9UBU2 259 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
PCDHGC3-204ENST00000617222 TMEM218A2RU14 115 aa11.16□□□□□ -0.62
PCDHGC3-204ENST00000617222 P01737 135 aa11.16□□□□□ -0.62
PCDHGC3-204ENST00000617222 S100A4P26447 101 aaKnown RBP11.16□□□□□ -0.62
PCDHGC3-204ENST00000617222 ASIPP42127 132 aa11.16□□□□□ -0.62
PCDHGC3-204ENST00000617222 DAZ2Q13117 558 aaKnown RBP11.16□□□□□ -0.62
PCDHGC3-204ENST00000617222 ADIRFQ15847 76 aa11.16□□□□□ -0.62
PCDHGC3-204ENST00000617222 OR2D3Q8NGH3 330 aa11.16□□□□□ -0.62
PCDHGC3-204ENST00000617222 LYRM9A8MSI8 78 aa11.15□□□□□ -0.62
PCDHGC3-204ENST00000617222 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
PCDHGC3-204ENST00000617222 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
PCDHGC3-204ENST00000617222 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
PCDHGC3-204ENST00000617222 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
PCDHGC3-204ENST00000617222 NANOS2P60321 138 aaKnown RBP11.14□□□□□ -0.63
PCDHGC3-204ENST00000617222 ISOC2Q96AB3 205 aa11.14□□□□□ -0.63
PCDHGC3-204ENST00000617222 SPXQ9BT56 116 aa11.14□□□□□ -0.63
PCDHGC3-204ENST00000617222 TRGV1A0A0A0MS02 117 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 TEX48A0A1B0GUV7 120 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 F8W036 122 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 H3BVH4 76 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 GATCO43716 136 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 SPINK4O60575 86 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 GZMBP10144 247 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 C12orf74Q32Q52 190 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 DNLZQ5SXM8 178 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 C9orf85Q96MD7 179 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 RPP21Q9H633 154 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 COL7A1Q02388 2944 aa11.13□□□□□ -0.63
PCDHGC3-204ENST00000617222 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 GAGE12BA1L429 117 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 GAGE7O76087 117 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 GAGE12FP0CL80 117 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 GAGE12GP0CL81 117 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 GAGE12IP0CL82 117 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 ADCYAP1P18509 176 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 DAD1P61803 113 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 Q6ZTI0 123 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
PCDHGC3-204ENST00000617222 TGP01266 2768 aa11.11□□□□□ -0.63
PCDHGC3-204ENST00000617222 XKRY2A2RUG3 117 aa11.11□□□□□ -0.63
PCDHGC3-204ENST00000617222 M0R2P5 195 aa11.11□□□□□ -0.63
PCDHGC3-204ENST00000617222 CXCL1P09341 107 aa11.11□□□□□ -0.63
PCDHGC3-204ENST00000617222 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
PCDHGC3-204ENST00000617222 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
PCDHGC3-204ENST00000617222 IL36BQ9NZH7 164 aa11.11□□□□□ -0.63
PCDHGC3-204ENST00000617222 LGALS9BQ3B8N2 356 aa11.1□□□□□ -0.63
PCDHGC3-204ENST00000617222 SLC7A5P1Q8MH63 180 aa11.1□□□□□ -0.63
PCDHGC3-204ENST00000617222 LINC00612Q8N6U2 182 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms