RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 GNRH2O43555 120 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 AVPP01185 164 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 EBI3Q14213 229 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 PRORYQ9H606 182 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
PRKD1-209ENST00000616995 VPS13CQ709C8 3753 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 A0A1B0GW15 77 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 IGHG4P01861 327 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 SMIM17P0DL12 118 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
PRKD1-209ENST00000616995 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
PRKD1-209ENST00000616995 K7EMI3 77 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 GCSHP23434 173 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 ST20Q9HBF5 79 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 TEX15Q9BXT5 2789 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 CLPSL1A2RUU4 121 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 PAX2Q02962 417 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 C10orf105Q8TEF2 133 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 DUX3Q96PT4 197 aa11.12□□□□□ -0.63
PRKD1-209ENST00000616995 C20orf173Q96LM9 149 aa11.11□□□□□ -0.63
PRKD1-209ENST00000616995 EMP1P54849 157 aa11.11□□□□□ -0.63
PRKD1-209ENST00000616995 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
PRKD1-209ENST00000616995 A0A087WWL8 130 aa11.11□□□□□ -0.63
PRKD1-209ENST00000616995 COX6B1P14854 86 aa11.11□□□□□ -0.63
PRKD1-209ENST00000616995 SYNJ2BPP57105 145 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 USP24Q9UPU5 2620 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 B4DSR2 109 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 CD7P09564 240 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 FASNP49327 2511 aaKnown RBP11.1□□□□□ -0.63
PRKD1-209ENST00000616995 ZFHX3Q15911 3703 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 TRAV8-2A0A0B4J237 113 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 LINC00477Q96M19 166 aa11.1□□□□□ -0.63
PRKD1-209ENST00000616995 ASIPP42127 132 aa11.09□□□□□ -0.63
PRKD1-209ENST00000616995 DEFB136Q30KP8 78 aa11.09□□□□□ -0.63
PRKD1-209ENST00000616995 PRR9Q5T870 116 aa11.09□□□□□ -0.63
PRKD1-209ENST00000616995 AMMECR1LQ6DCA0 310 aa11.09□□□□□ -0.63
PRKD1-209ENST00000616995 FAM159AQ6UWV7 190 aa11.09□□□□□ -0.63
PRKD1-209ENST00000616995 C12orf54Q6X4T0 127 aa11.09□□□□□ -0.63
PRKD1-209ENST00000616995 OR2K2Q8NGT1 345 aa11.09□□□□□ -0.63
PRKD1-209ENST00000616995 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
PRKD1-209ENST00000616995 A0A0G2JLM5 398 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 ZNF48Q96MX3 618 aaPredicted RBP11.07□□□□□ -0.64
PRKD1-209ENST00000616995 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 FAM223BA6NKX1 122 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 FAM223AQ8IWN6 122 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 PIFOQ8TCI5 191 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 RPL39LQ96EH5 51 aaKnown RBP11.07□□□□□ -0.64
PRKD1-209ENST00000616995 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
PRKD1-209ENST00000616995 IGHV3-73A0A0B4J1V6 119 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 JPT2Q9H910 190 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 KLK9Q9UKQ9 250 aa11.07□□□□□ -0.64
PRKD1-209ENST00000616995 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
PRKD1-209ENST00000616995 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
PRKD1-209ENST00000616995 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
PRKD1-209ENST00000616995 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
PRKD1-209ENST00000616995 COX11Q9Y6N1 276 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 IGHV3OR16-12A0A075B7B8 117 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 H3BUT2 72 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 CCL25O15444 150 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 LINC01545Q5VT33 79 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 SPINK13Q1W4C9 94 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 SFTA2Q6UW10 78 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 C16orf54Q6UWD8 224 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
PRKD1-209ENST00000616995 NXT2Q9NPJ8 142 aaKnown RBP11.05□□□□□ -0.64
PRKD1-209ENST00000616995 TMEM97Q5BJF2 176 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 BVES-AS1Q5T3Y7 98 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 TRBV6-1A0A0K0K1D8 114 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 PPBPP02775 128 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 ID1P41134 155 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 DPF1Q92782 380 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 TMEM8BA6NDV4 472 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 K7EP13 123 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 ZNF56Q15929 161 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 HIST2H2BCQ6DN03 193 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 RNF185Q96GF1 192 aa11.04□□□□□ -0.64
PRKD1-209ENST00000616995 FLNAP21333 2647 aaKnown RBP11.03□□□□□ -0.64
PRKD1-209ENST00000616995 NF1P21359 2839 aa11.03□□□□□ -0.64
PRKD1-209ENST00000616995 A0A096LNJ9 63 aa11.03□□□□□ -0.64
PRKD1-209ENST00000616995 NDUFA4O00483 81 aa11.03□□□□□ -0.64
PRKD1-209ENST00000616995 SCRT2Q9NQ03 307 aa11.03□□□□□ -0.64
PRKD1-209ENST00000616995 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
PRKD1-209ENST00000616995 MRPL35Q9NZE8 188 aaKnown RBP11.03□□□□□ -0.64
PRKD1-209ENST00000616995 LAGE3Q14657 143 aa11.03□□□□□ -0.64
PRKD1-209ENST00000616995 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
PRKD1-209ENST00000616995 USMG5Q96IX5 58 aa11.02□□□□□ -0.65
PRKD1-209ENST00000616995 JMJD8Q96S16 334 aa11.02□□□□□ -0.65
PRKD1-209ENST00000616995 FBN2P35556 2912 aa11.02□□□□□ -0.65
PRKD1-209ENST00000616995 COX8AP10176 69 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms