RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CD28P10747 220 aa10.61□□□□□ -0.71
PPP4R3B-205ENST00000616288 EIF4EBP1Q13541 118 aaPredicted RBP10.61□□□□□ -0.71
PPP4R3B-205ENST00000616288 HRCT1Q6UXD1 115 aa10.61□□□□□ -0.71
PPP4R3B-205ENST00000616288 NACAE9PAV3 2078 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 A0A087WWL8 130 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 IGKV3D-7A0A0C4DH55 119 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 C17orf82Q86X59 251 aaPredicted RBP10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 SIGLEC9Q9Y336 463 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 GPR179Q6PRD1 2367 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 K7EM74 188 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 PDE6HQ13956 83 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 Q71RC1 249 aaPredicted RBP10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 IGKV1D-37A0A075B6S9 117 aa10.6□□□□□ -0.71
PPP4R3B-205ENST00000616288 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 NDPQ00604 133 aa10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 ZNF415Q09FC8 603 aa10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 C1orf162Q8NEQ5 155 aaPredicted RBP10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 C7orf69Q9H7B7 122 aa10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 C11orf86A6NJI1 115 aa10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 CRIP2P52943 208 aaPredicted RBP10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 EXPH5Q8NEV8 1989 aa10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 LINC01548A6NM66 108 aa10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 C1orf229Q6ZS94 237 aaPredicted RBP10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 PEMTQ9UBM1 199 aa10.59□□□□□ -0.71
PPP4R3B-205ENST00000616288 RBAKDNA6NC62 111 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 PATE3B3GLJ2 98 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 TMEM200BQ69YZ2 307 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 CFHR4Q92496 578 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 PRO0461Q9UI25 63 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 C16orf97H3BN30 126 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 CRIP1P50238 77 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 IGHV1-18A0A0C4DH31 117 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 H3BRN7 92 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 ASCL5Q7RTU5 278 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 SIT1Q9Y3P8 196 aa10.58□□□□□ -0.72
PPP4R3B-205ENST00000616288 TRIOBPQ9H2D6 2365 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 VCYO14598 125 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 CLEC19AQ6UXS0 136 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 BAALCQ8WXS3 180 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 ATOX1O00244 68 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 GAFA1Q96PS6 74 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 MKI67P46013 3256 aaKnown RBP10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 VCANP13611 3396 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 FHL3Q13643 280 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 ICOSQ9Y6W8 199 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 CDH23Q9H251 3354 aa10.57□□□□□ -0.72
PPP4R3B-205ENST00000616288 LGALS9O00182 355 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 Q0VFX4 171 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 Q6ZS92 163 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 ZNF491Q8N8L2 437 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 PIFOQ8TCI5 191 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 EP300Q09472 2414 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 LTBRP36941 435 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 RNF138Q8WVD3 245 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 NRGNQ92686 78 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 ATP1A1-AS1Q5TC04 95 aa10.56□□□□□ -0.72
PPP4R3B-205ENST00000616288 INAFM2P0DMQ5 153 aa10.55□□□□□ -0.72
PPP4R3B-205ENST00000616288 MYCNOSP40205 109 aa10.55□□□□□ -0.72
PPP4R3B-205ENST00000616288 DYNAPQ8N1N2 210 aa10.55□□□□□ -0.72
PPP4R3B-205ENST00000616288 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
PPP4R3B-205ENST00000616288 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
PPP4R3B-205ENST00000616288 A0A0U1RQV1 116 aa10.55□□□□□ -0.72
PPP4R3B-205ENST00000616288 ZNF876PQ49A33 203 aa10.55□□□□□ -0.72
PPP4R3B-205ENST00000616288 M0R1W7 72 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 BRI3O95415 125 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 ZNF80P51504 273 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 NDUFA12Q9UI09 145 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 A0A0J9YY99 117 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 IGKV1-17P01599 117 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 GFRALQ6UXV0 394 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 COPS9Q8WXC6 57 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 ACYP1P07311 99 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 RHOHQ15669 191 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 SPANXDQ9BXN6 97 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 TOMM7Q9P0U1 55 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 NCKAP5O14513 1909 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 IGHV1-46P01743 117 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 RNF152Q8N8N0 203 aa10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 TET2Q6N021 2002 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3B-205ENST00000616288 H3BT86 120 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 THBDP07204 575 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 ZNF833PQ6ZTB9 187 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 TRAV17A0A0B4J275 112 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 SDHAF1A6NFY7 115 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 NBR2O15453 112 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 BAALC-AS2P0C853 105 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 Q6Q795 121 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 C9orf106Q8NAJ2 232 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 DSCR8Q96T75 97 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 SPRR3Q9UBC9 169 aa10.53□□□□□ -0.72
PPP4R3B-205ENST00000616288 CRYGBP07316 175 aa10.52□□□□□ -0.72
PPP4R3B-205ENST00000616288 C19orf54Q5BKX5 351 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms