RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 Q6ZTC4 211 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 ZC2HC1AQ96GY0 325 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 TP53TG3Q9ULZ0 132 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 TMEM250H0YL14 139 aa9.46□□□□□ -0.9
MDC1-209ENST00000613547 GNG4P50150 75 aa9.46□□□□□ -0.9
MDC1-209ENST00000613547 ZNF767PQ75MW2 155 aa9.46□□□□□ -0.9
MDC1-209ENST00000613547 NHLRC2Q8NBF2 726 aa9.46□□□□□ -0.9
MDC1-209ENST00000613547 C11orf72Q8NBR9 251 aa9.46□□□□□ -0.9
MDC1-209ENST00000613547 SMIM12Q96EX1 92 aa9.46□□□□□ -0.9
MDC1-209ENST00000613547 DERL1Q9BUN8 251 aa9.46□□□□□ -0.9
MDC1-209ENST00000613547 SH2D1AO60880 128 aa9.45□□□□□ -0.9
MDC1-209ENST00000613547 ORM1P02763 201 aa9.45□□□□□ -0.9
MDC1-209ENST00000613547 CENPWQ5EE01 88 aa9.45□□□□□ -0.9
MDC1-209ENST00000613547 PCNPQ8WW12 178 aaKnown RBP9.45□□□□□ -0.9
MDC1-209ENST00000613547 SPXQ9BT56 116 aa9.45□□□□□ -0.9
MDC1-209ENST00000613547 DEFB131BA0A096LNP1 70 aa9.44□□□□□ -0.9
MDC1-209ENST00000613547 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
MDC1-209ENST00000613547 NDUFS6O75380 124 aaKnown RBP9.44□□□□□ -0.9
MDC1-209ENST00000613547 TYMSP04818 313 aa9.44□□□□□ -0.9
MDC1-209ENST00000613547 MLST8Q9BVC4 326 aa9.44□□□□□ -0.9
MDC1-209ENST00000613547 BIN3Q9NQY0 253 aa9.44□□□□□ -0.9
MDC1-209ENST00000613547 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
MDC1-209ENST00000613547 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
MDC1-209ENST00000613547 TRGV2A0A075B6R0 118 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 IGHV3-16A0A0C4DH30 117 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 GAGE12BA1L429 117 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 B4DEV8 164 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 GNRH2O43555 120 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 GAGE7O76087 117 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 ATP5G1P05496 136 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 GAGE12FP0CL80 117 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 GAGE12GP0CL81 117 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 GAGE12IP0CL82 117 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 MGST1P10620 155 aaKnown RBP9.43□□□□□ -0.9
MDC1-209ENST00000613547 HTN3P15516 51 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 S100A4P26447 101 aaKnown RBP9.43□□□□□ -0.9
MDC1-209ENST00000613547 ASIPP42127 132 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 CEBPGP53567 150 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 ZNF674Q2M3X9 581 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 PRR27Q6MZM9 219 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 PARLQ9H300 379 aa9.43□□□□□ -0.9
MDC1-209ENST00000613547 M0R036 132 aa9.42□□□□□ -0.9
MDC1-209ENST00000613547 SPINK4O60575 86 aa9.42□□□□□ -0.9
MDC1-209ENST00000613547 CRIP1P50238 77 aa9.42□□□□□ -0.9
MDC1-209ENST00000613547 OR5I1Q13606 314 aa9.42□□□□□ -0.9
MDC1-209ENST00000613547 Q6ZTI0 123 aa9.42□□□□□ -0.9
MDC1-209ENST00000613547 LINC00612Q8N6U2 182 aa9.42□□□□□ -0.9
MDC1-209ENST00000613547 DAZAP1Q96EP5 407 aaKnown RBP9.42□□□□□ -0.9
MDC1-209ENST00000613547 IGKV3D-20A0A0C4DH25 116 aa9.41□□□□□ -0.9
MDC1-209ENST00000613547 C9JCJ5 164 aa9.41□□□□□ -0.9
MDC1-209ENST00000613547 TCTAP57738 103 aa9.41□□□□□ -0.9
MDC1-209ENST00000613547 PEA15Q15121 130 aa9.41□□□□□ -0.9
MDC1-209ENST00000613547 C18orf15Q96N68 181 aa9.41□□□□□ -0.9
MDC1-209ENST00000613547 SMDT1Q9H4I9 107 aa9.41□□□□□ -0.9
MDC1-209ENST00000613547 MRPL16Q9NX20 251 aaKnown RBP9.41□□□□□ -0.9
MDC1-209ENST00000613547 IGLL5B9A064 214 aa9.4□□□□□ -0.9
MDC1-209ENST00000613547 KRBOX1C9JBD0 128 aa9.4□□□□□ -0.9
MDC1-209ENST00000613547 F5H768 121 aa9.4□□□□□ -0.9
MDC1-209ENST00000613547 M0R2P5 195 aa9.4□□□□□ -0.9
MDC1-209ENST00000613547 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
MDC1-209ENST00000613547 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
MDC1-209ENST00000613547 TRBV20OR9-2A0A075B6H5 130 aa9.39□□□□□ -0.91
MDC1-209ENST00000613547 TMSB15BA0A087X1C1 80 aa9.39□□□□□ -0.91
MDC1-209ENST00000613547 SRP19P09132 144 aaKnown RBP9.39□□□□□ -0.91
MDC1-209ENST00000613547 RASL10AQ92737 203 aa9.39□□□□□ -0.91
MDC1-209ENST00000613547 SMIM7Q9BQ49 75 aa9.39□□□□□ -0.91
MDC1-209ENST00000613547 GRIFINA4D1Z8 144 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 PGPEP1LA6NFU8 196 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 ZNF876PQ49A33 203 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 CLLU1Q5K131 121 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 NDUFAF3Q9BU61 184 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 IL36BQ9NZH7 164 aa9.38□□□□□ -0.91
MDC1-209ENST00000613547 IGHV4-4A0A075B6R2 117 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 XKRY2A2RUG3 117 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 P01737 135 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 CXCL1P09341 107 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 RNASE3P12724 160 aaKnown RBP9.37□□□□□ -0.91
MDC1-209ENST00000613547 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
MDC1-209ENST00000613547 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 PTH2Q96A98 100 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
MDC1-209ENST00000613547 DNAH7Q8WXX0 4024 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 H3BVH4 76 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 ARMS2P0C7Q2 107 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 IFITM2Q01629 132 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
MDC1-209ENST00000613547 C19orf71A6NCJ1 209 aa9.35□□□□□ -0.91
MDC1-209ENST00000613547 IGHV3-53P01767 116 aa9.35□□□□□ -0.91
MDC1-209ENST00000613547 RPL19P84098 196 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms