RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 DANCRP0C864 163 aa8.71□□□□□ -1.01
CNTNAP3B-211ENST00000612828 C5orf56Q8N8D9 126 aa8.71□□□□□ -1.01
CNTNAP3B-211ENST00000612828 RTBDNQ9BSG5 229 aaPredicted RBP8.71□□□□□ -1.01
CNTNAP3B-211ENST00000612828 CRYGDP07320 174 aa8.71□□□□□ -1.01
CNTNAP3B-211ENST00000612828 A0A1B0GW64 132 aa8.71□□□□□ -1.01
CNTNAP3B-211ENST00000612828 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.01
CNTNAP3B-211ENST00000612828 DSCR9P59020 149 aa8.71□□□□□ -1.01
CNTNAP3B-211ENST00000612828 SPG11Q96JI7 2443 aa8.71□□□□□ -1.02
CNTNAP3B-211ENST00000612828 MST1P26927 711 aa8.71□□□□□ -1.02
CNTNAP3B-211ENST00000612828 CRIPAKQ8N1N5 446 aa8.71□□□□□ -1.02
CNTNAP3B-211ENST00000612828 SLC25A29Q8N8R3 303 aa8.71□□□□□ -1.02
CNTNAP3B-211ENST00000612828 RNF126Q9BV68 326 aa8.71□□□□□ -1.02
CNTNAP3B-211ENST00000612828 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
CNTNAP3B-211ENST00000612828 ZFP36P26651 326 aaKnown RBP8.71□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGKV1D-8A0A087WSZ0 117 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGHV2-26A0A0B4J1V2 119 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 RNF144BQ7Z419 303 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 OVOL3O00110 214 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGLV2-8P01709 118 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 CARHSP1Q9Y2V2 147 aaKnown RBP8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 NTN3O00634 580 aaPredicted RBP8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 WISP1O95388 367 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 UNQ6494/PRO21346Q6UXR6 183 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 K7EP34 96 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 SRXN1Q9BYN0 137 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 NUPR2A6NF83 97 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 CFPP27918 469 aa8.7□□□□□ -1.02
CNTNAP3B-211ENST00000612828 G3V4G9 280 aa8.69□□□□□ -1.02
CNTNAP3B-211ENST00000612828 Q0VFX4 171 aa8.69□□□□□ -1.02
CNTNAP3B-211ENST00000612828 PAQR4Q8N4S7 273 aaPredicted RBP8.69□□□□□ -1.02
CNTNAP3B-211ENST00000612828 POM121L12Q8N7R1 296 aa8.69□□□□□ -1.02
CNTNAP3B-211ENST00000612828 MT-ATP8P03928 68 aa8.69□□□□□ -1.02
CNTNAP3B-211ENST00000612828 LINC00337Q8N6G1 96 aa8.69□□□□□ -1.02
CNTNAP3B-211ENST00000612828 Q8NFD4 153 aa8.69□□□□□ -1.02
CNTNAP3B-211ENST00000612828 FAM240AA0A1B0GVK7 77 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 HIST2H2BDQ6DRA6 164 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 APRG1Q8IVJ8 170 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IMUPQ9GZP8 106 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGKV1D-17A0A075B6S4 117 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 WI2-2373I1.2A0A1W2PRP0 233 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 SBF2Q86WG5 1849 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 K7ERJ3 54 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 WDR86Q86TI4 376 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 FLVCR1-AS1Q8TAF5 88 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 REG4Q9BYZ8 158 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGHV1-58A0A0C4DH39 117 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 FAM236AA0A1B0GUQ0 79 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 FAM236BA0A1B0GV22 79 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 RAMP3O60896 148 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGHV1-2P23083 117 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 CCL20P78556 96 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 BVES-AS1Q5T3Y7 98 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 ATAD5Q96QE3 1844 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 A6NDX4 124 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 FSHBP01225 129 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGLV2-11P01706 119 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 TMEM133Q9H2Q1 129 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 VPREB3Q9UKI3 123 aa8.68□□□□□ -1.02
CNTNAP3B-211ENST00000612828 PRSS47A8MTI9 375 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 PVRIGQ6DKI7 326 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 AGMATQ9BSE5 352 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 BRCA1P38398 1863 aaKnown RBP8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 H3BT86 120 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 TM4SF5O14894 197 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 FAM19A5Q7Z5A7 132 aaPredicted RBP8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 SRCAPQ6ZRS2 3230 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 Q8N9L7 120 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 C17orf100A8MU93 164 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 CECR9P0C854 216 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 Q6ZWC4 215 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 DAND5Q8N907 189 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 Q9H8V8 135 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 KLK12Q9UKR0 248 aa8.67□□□□□ -1.02
CNTNAP3B-211ENST00000612828 RFPL3SP0C7P2 107 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 C5orf24Q7Z6I8 188 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 ARMS2P0C7Q2 107 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 BPESC1Q9GZL8 116 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 ATP5IP56385 69 aaPredicted RBP8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 J3QKU1 62 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGHV2OR16-5A0A0B4J2B6 119 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 IGLV2-14P01704 120 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 C20orf204Q6ZNR8 217 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 RPRMLQ8N4K4 120 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 CCL24O00175 119 aa8.66□□□□□ -1.02
CNTNAP3B-211ENST00000612828 BPY2O14599 106 aa8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 HELZP42694 1942 aaKnown RBP8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 C5orf63A6NC05 138 aa8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 LINC01620Q4KN68 170 aa8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 SMIM8Q96KF7 97 aa8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 ROS1P08922 2347 aa8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 VPREB1P12018 145 aa8.65□□□□□ -1.02
CNTNAP3B-211ENST00000612828 DNAJC9-AS1A6NH13 148 aa8.65□□□□□ -1.03
CNTNAP3B-211ENST00000612828 SPART-AS1P0CW21 52 aa8.65□□□□□ -1.03
CNTNAP3B-211ENST00000612828 LGALS9O00182 355 aa8.65□□□□□ -1.03
CNTNAP3B-211ENST00000612828 DENND4CQ5VZ89 1909 aa8.65□□□□□ -1.03
CNTNAP3B-211ENST00000612828 IGHV1-69DA0A0B4J2H0 117 aa8.64□□□□□ -1.03
CNTNAP3B-211ENST00000612828 IGHV1-69P01742 117 aa8.64□□□□□ -1.03
CNTNAP3B-211ENST00000612828 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms