RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 KRTAP10-2P60368 255 aa12.52□□□□□ -0.41
CCDC12-213ENST00000605875 TMEM167BQ9NRX6 74 aa12.52□□□□□ -0.41
CCDC12-213ENST00000605875 MRPS16Q9Y3D3 137 aaKnown RBP12.52□□□□□ -0.41
CCDC12-213ENST00000605875 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 A0A1W2PPQ1 181 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 SMLR1H3BR10 107 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 ARPC5O15511 151 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 BTF3P20290 206 aaKnown RBP12.51□□□□□ -0.41
CCDC12-213ENST00000605875 ZNF726P1Q15940 193 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 C8orf49Q96NF6 230 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 NDFIP1Q9BT67 221 aa12.51□□□□□ -0.41
CCDC12-213ENST00000605875 PAX4O43316 350 aa12.5□□□□□ -0.41
CCDC12-213ENST00000605875 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
CCDC12-213ENST00000605875 ICOSQ9Y6W8 199 aa12.5□□□□□ -0.41
CCDC12-213ENST00000605875 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 CTXND1A0A1B0GTU2 59 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 TYMSP04818 313 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 FHL2Q14192 279 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 CYB561D1Q8N8Q1 229 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 SPXQ9BT56 116 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 SDF2L1Q9HCN8 221 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
CCDC12-213ENST00000605875 K7EQM0 130 aa12.48□□□□□ -0.41
CCDC12-213ENST00000605875 GNRH2O43555 120 aa12.48□□□□□ -0.41
CCDC12-213ENST00000605875 CRYBA4P53673 196 aa12.48□□□□□ -0.41
CCDC12-213ENST00000605875 SUMO1P63165 101 aaKnown RBP12.48□□□□□ -0.41
CCDC12-213ENST00000605875 AKR1C8PQ5T2L2 129 aa12.48□□□□□ -0.41
CCDC12-213ENST00000605875 ZNF479Q96JC4 524 aa12.48□□□□□ -0.41
CCDC12-213ENST00000605875 EPDR1Q9UM22 224 aa12.48□□□□□ -0.41
CCDC12-213ENST00000605875 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
CCDC12-213ENST00000605875 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 GCGP01275 180 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 IGLV2-11P01706 119 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-213ENST00000605875 FGF8P55075 233 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-213ENST00000605875 UBE2G2P60604 165 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 FLI1Q01543 452 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-213ENST00000605875 PRNTQ86SH4 94 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 RASL10AQ92737 203 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 HHLA3Q9XRX5 114 aa12.47□□□□□ -0.41
CCDC12-213ENST00000605875 ZFP69Q49AA0 526 aa12.46□□□□□ -0.41
CCDC12-213ENST00000605875 CYTL1Q9NRR1 136 aa12.46□□□□□ -0.41
CCDC12-213ENST00000605875 C11orf21Q9P2W6 132 aa12.46□□□□□ -0.41
CCDC12-213ENST00000605875 A0A1W2PRE2 83 aa12.45□□□□□ -0.42
CCDC12-213ENST00000605875 M0R2P5 195 aa12.45□□□□□ -0.42
CCDC12-213ENST00000605875 TAAR5O14804 337 aa12.45□□□□□ -0.42
CCDC12-213ENST00000605875 SLAQ13239 276 aa12.45□□□□□ -0.42
CCDC12-213ENST00000605875 KCNS1Q96KK3 526 aa12.45□□□□□ -0.42
CCDC12-213ENST00000605875 TRAV4A0A0B4J268 109 aa12.44□□□□□ -0.42
CCDC12-213ENST00000605875 MAP1LC3B2A6NCE7 125 aa12.44□□□□□ -0.42
CCDC12-213ENST00000605875 IFNA7P01567 189 aa12.44□□□□□ -0.42
CCDC12-213ENST00000605875 LINC00315P59091 139 aa12.44□□□□□ -0.42
CCDC12-213ENST00000605875 MAP1LC3BQ9GZQ8 125 aa12.44□□□□□ -0.42
CCDC12-213ENST00000605875 TRAV34A0A0B4J273 112 aa12.43□□□□□ -0.42
CCDC12-213ENST00000605875 NXPH4O95158 308 aa12.43□□□□□ -0.42
CCDC12-213ENST00000605875 PFN1P07737 140 aaKnown RBP12.43□□□□□ -0.42
CCDC12-213ENST00000605875 SMUG1Q53HV7 270 aa12.43□□□□□ -0.42
CCDC12-213ENST00000605875 Q86TA4 180 aa12.43□□□□□ -0.42
CCDC12-213ENST00000605875 OR4C5Q8NGB2 326 aa12.43□□□□□ -0.42
CCDC12-213ENST00000605875 PCNPQ8WW12 178 aaKnown RBP12.43□□□□□ -0.42
CCDC12-213ENST00000605875 LINC00479Q96M42 142 aa12.43□□□□□ -0.42
CCDC12-213ENST00000605875 FAM74A7A6NL05 159 aa12.42□□□□□ -0.42
CCDC12-213ENST00000605875 K7EQD1 137 aa12.42□□□□□ -0.42
CCDC12-213ENST00000605875 PEX7O00628 323 aa12.42□□□□□ -0.42
CCDC12-213ENST00000605875 SRIP30626 198 aa12.42□□□□□ -0.42
CCDC12-213ENST00000605875 MRPL23Q16540 153 aaKnown RBP12.42□□□□□ -0.42
CCDC12-213ENST00000605875 ARL2-SNX15V9GYD0 113 aa12.42□□□□□ -0.42
CCDC12-213ENST00000605875 FBLL1A6NHQ2 334 aaKnown RBP12.41□□□□□ -0.42
CCDC12-213ENST00000605875 SIVA1O15304 175 aa12.41□□□□□ -0.42
CCDC12-213ENST00000605875 GYPEP15421 78 aa12.41□□□□□ -0.42
CCDC12-213ENST00000605875 ZNF345Q14585 488 aa12.41□□□□□ -0.42
CCDC12-213ENST00000605875 Q6ZRN7 208 aaPredicted RBP12.41□□□□□ -0.42
CCDC12-213ENST00000605875 KCNRGQ8N5I3 272 aa12.41□□□□□ -0.42
CCDC12-213ENST00000605875 EPM2AB3EWF7 344 aa12.4□□□□□ -0.42
CCDC12-213ENST00000605875 C9JCJ5 164 aa12.4□□□□□ -0.42
CCDC12-213ENST00000605875 FHITP49789 147 aa12.4□□□□□ -0.42
CCDC12-213ENST00000605875 PPT1P50897 306 aa12.4□□□□□ -0.42
CCDC12-213ENST00000605875 NEGR1Q7Z3B1 354 aa12.4□□□□□ -0.42
CCDC12-213ENST00000605875 OR11H4Q8NGC9 324 aa12.4□□□□□ -0.42
CCDC12-213ENST00000605875 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
CCDC12-213ENST00000605875 LOC100131303A0A0U1RQF7 123 aa12.39□□□□□ -0.43
CCDC12-213ENST00000605875 ORM1P02763 201 aa12.39□□□□□ -0.43
CCDC12-213ENST00000605875 SAPCD1Q5SSQ6 148 aa12.39□□□□□ -0.43
CCDC12-213ENST00000605875 LYPD5Q6UWN5 251 aa12.39□□□□□ -0.43
CCDC12-213ENST00000605875 C9orf85Q96MD7 179 aa12.39□□□□□ -0.43
CCDC12-213ENST00000605875 EREGO14944 169 aa12.38□□□□□ -0.43
CCDC12-213ENST00000605875 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
CCDC12-213ENST00000605875 DPPA3Q6W0C5 159 aa12.38□□□□□ -0.43
CCDC12-213ENST00000605875 HERC1Q15751 4861 aa12.38□□□□□ -0.43
CCDC12-213ENST00000605875 BCL2L11O43521 198 aa12.37□□□□□ -0.43
CCDC12-213ENST00000605875 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
CCDC12-213ENST00000605875 GATA1P15976 413 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-213ENST00000605875 FUSP35637 526 aaKnown RBP eCLIP12.37□□□□□ -0.431e-8■■■■□ 25.3
CCDC12-213ENST00000605875 ZNF506Q5JVG8 444 aa12.37□□□□□ -0.43
CCDC12-213ENST00000605875 HIST1H2BAQ96A08 127 aa12.37□□□□□ -0.43
CCDC12-213ENST00000605875 ZNF471Q9BX82 626 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-213ENST00000605875 NKX6-2Q9C056 277 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms