RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 F5H768 121 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 HAMPP81172 84 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 C17orf77Q96MU5 243 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 TMEM126AQ9H061 195 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 PCP2Q8IVA1 136 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 AMTNQ6UX39 209 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 SLC25A29Q8N8R3 303 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 FGF23Q9GZV9 251 aaPredicted RBP16.53■□□□□ 0.24
SH3D19-211ENST00000604030 PLA2G2EQ9NZK7 142 aa16.53■□□□□ 0.24
SH3D19-211ENST00000604030 RNF223E7ERA6 249 aa16.52■□□□□ 0.24
SH3D19-211ENST00000604030 MED14OSP0DP75 135 aa16.52■□□□□ 0.24
SH3D19-211ENST00000604030 CTSZQ9UBR2 303 aa16.52■□□□□ 0.24
SH3D19-211ENST00000604030 HOXB4P17483 251 aaPredicted RBP16.52■□□□□ 0.23
SH3D19-211ENST00000604030 WNK2Q9Y3S1 2297 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 CDPF1Q6NVV7 123 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 IGHV3-38A0A0C4DH36 116 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 C22orf46C9J442 243 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 H3BQ85 93 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 CCL25O15444 150 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 PRR30Q53SZ7 412 aaPredicted RBP16.51■□□□□ 0.23
SH3D19-211ENST00000604030 IGFL2Q6UWQ7 119 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 IGLV11-55A0A075B6I3 123 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 H0YGX0 51 aa16.51■□□□□ 0.23
SH3D19-211ENST00000604030 HOXD3P31249 432 aaPredicted RBP16.51■□□□□ 0.23
SH3D19-211ENST00000604030 K7EIM0 57 aa16.5■□□□□ 0.23
SH3D19-211ENST00000604030 YLPM1P49750 1951 aaKnown RBP16.5■□□□□ 0.23
SH3D19-211ENST00000604030 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
SH3D19-211ENST00000604030 ORMDL1Q9P0S3 153 aa16.5■□□□□ 0.23
SH3D19-211ENST00000604030 TICRRQ7Z2Z1 1910 aa16.49■□□□□ 0.23
SH3D19-211ENST00000604030 IGKV1-17P01599 117 aa16.49■□□□□ 0.23
SH3D19-211ENST00000604030 PATE2Q6UY27 113 aa16.49■□□□□ 0.23
SH3D19-211ENST00000604030 FAM167A-AS1Q96KT0 104 aa16.49■□□□□ 0.23
SH3D19-211ENST00000604030 POLEQ07864 2286 aa16.49■□□□□ 0.23
SH3D19-211ENST00000604030 ACACAQ13085 2346 aa16.48■□□□□ 0.23
SH3D19-211ENST00000604030 DOCK8Q8NF50 2099 aa16.48■□□□□ 0.23
SH3D19-211ENST00000604030 ROS1P08922 2347 aa16.48■□□□□ 0.23
SH3D19-211ENST00000604030 CENPVL3A0A0U1RRI6 287 aa16.48■□□□□ 0.23
SH3D19-211ENST00000604030 SP5Q6BEB4 398 aaPredicted RBP16.48■□□□□ 0.23
SH3D19-211ENST00000604030 BAALC-AS2P0C853 105 aa16.48■□□□□ 0.23
SH3D19-211ENST00000604030 NXPH4O95158 308 aa16.47■□□□□ 0.23
SH3D19-211ENST00000604030 CFHR3Q02985 330 aa16.47■□□□□ 0.23
SH3D19-211ENST00000604030 ANKRD39Q53RE8 183 aa16.47■□□□□ 0.23
SH3D19-211ENST00000604030 GNRH2O43555 120 aa16.47■□□□□ 0.23
SH3D19-211ENST00000604030 NUPR1O60356 82 aa16.46■□□□□ 0.23
SH3D19-211ENST00000604030 Q9H8V8 135 aa16.46■□□□□ 0.23
SH3D19-211ENST00000604030 CR1LQ2VPA4 569 aa16.46■□□□□ 0.23
SH3D19-211ENST00000604030 TEN1Q86WV5 123 aa16.46■□□□□ 0.23
SH3D19-211ENST00000604030 MGAMO43451 1857 aa16.46■□□□□ 0.23
SH3D19-211ENST00000604030 HELZP42694 1942 aaKnown RBP16.46■□□□□ 0.23
SH3D19-211ENST00000604030 WI2-2373I1.2A0A1W2PRP0 233 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 CTRLP40313 264 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 TMEM258P61165 79 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 IGF2-ASQ6U949 168 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 CRYBA4P53673 196 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 PIP4P1Q86T03 277 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 C11orf1Q9H5F2 150 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 ABCA1O95477 2261 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 C16orf54Q6UWD8 224 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 ANAPC1Q9H1A4 1944 aa16.45■□□□□ 0.22
SH3D19-211ENST00000604030 ZFP2Q6ZN57 461 aa16.44■□□□□ 0.22
SH3D19-211ENST00000604030 VPREB3Q9UKI3 123 aa16.44■□□□□ 0.22
SH3D19-211ENST00000604030 TEX48A0A1B0GUV7 120 aa16.44■□□□□ 0.22
SH3D19-211ENST00000604030 TIMM17AQ99595 171 aa16.44■□□□□ 0.22
SH3D19-211ENST00000604030 IGHV7-81A0A0B4J1V7 117 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 SUMO4Q6EEV6 95 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 ZNF407Q9C0G0 2248 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 BUB3O43684 328 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 CRYGCP07315 174 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 C9orf47Q6ZRZ4 202 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 U3KQE9 123 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 TANC1Q9C0D5 1861 aa16.43■□□□□ 0.22
SH3D19-211ENST00000604030 CTSGP08311 255 aa16.42■□□□□ 0.22
SH3D19-211ENST00000604030 PKDREJQ9NTG1 2253 aa16.42■□□□□ 0.22
SH3D19-211ENST00000604030 ASPHD1Q5U4P2 390 aa16.42■□□□□ 0.22
SH3D19-211ENST00000604030 PKIGQ9Y2B9 76 aa16.42■□□□□ 0.22
SH3D19-211ENST00000604030 TRAV25A0A0B4J276 109 aa16.41■□□□□ 0.22
SH3D19-211ENST00000604030 ANGP03950 147 aaKnown RBP16.41■□□□□ 0.22
SH3D19-211ENST00000604030 E9PLD3 99 aa16.41■□□□□ 0.22
SH3D19-211ENST00000604030 DAZ2Q13117 558 aaKnown RBP16.41■□□□□ 0.22
SH3D19-211ENST00000604030 DAZ4Q86SG3 579 aaKnown RBP16.41■□□□□ 0.22
SH3D19-211ENST00000604030 ATP6V0E2Q8NHE4 81 aa16.41■□□□□ 0.22
SH3D19-211ENST00000604030 DAZ3Q9NR90 486 aaKnown RBP16.41■□□□□ 0.22
SH3D19-211ENST00000604030 GTSF1Q8WW33 167 aa16.41■□□□□ 0.22
SH3D19-211ENST00000604030 TOMM6Q96B49 74 aa16.4■□□□□ 0.22
SH3D19-211ENST00000604030 K7EMT4 169 aa16.4■□□□□ 0.22
SH3D19-211ENST00000604030 GATA1P15976 413 aaPredicted RBP16.4■□□□□ 0.22
SH3D19-211ENST00000604030 SH2D6Q7Z4S9 175 aa16.4■□□□□ 0.22
SH3D19-211ENST00000604030 SPATA12Q7Z6I5 190 aa16.4■□□□□ 0.22
SH3D19-211ENST00000604030 FRMPD3Q5JV73 1810 aa16.4■□□□□ 0.22
SH3D19-211ENST00000604030 ICOSQ9Y6W8 199 aa16.39■□□□□ 0.21
SH3D19-211ENST00000604030 LINC01620Q4KN68 170 aa16.39■□□□□ 0.21
SH3D19-211ENST00000604030 A0A0B4J2C4 111 aa16.39■□□□□ 0.21
SH3D19-211ENST00000604030 F6UB75 175 aa16.39■□□□□ 0.21
SH3D19-211ENST00000604030 TAX1BP3O14907 124 aa16.39■□□□□ 0.21
SH3D19-211ENST00000604030 ATOX1O00244 68 aa16.39■□□□□ 0.21
SH3D19-211ENST00000604030 LINC00173Q6ZV60 143 aa16.39■□□□□ 0.21
SH3D19-211ENST00000604030 KIAA1671Q9BY89 1806 aa16.38■□□□□ 0.21
SH3D19-211ENST00000604030 DEFB121Q5J5C9 76 aa16.38■□□□□ 0.21
SH3D19-211ENST00000604030 Q96MF0 132 aa16.38■□□□□ 0.21
SH3D19-211ENST00000604030 A4D1N5 150 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms