RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TYMSP04818 313 aa15.51■□□□□ 0.07
SSBP4-209ENST00000601357 LYPD5Q6UWN5 251 aa15.51■□□□□ 0.07
SSBP4-209ENST00000601357 INO80EQ8NBZ0 244 aaPredicted RBP15.51■□□□□ 0.07
SSBP4-209ENST00000601357 GGTLC3B5MD39 225 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 M0R2P5 195 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 NXPH4O95158 308 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 CXorf1O96002 111 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 RPL7L1Q6DKI1 246 aaKnown RBP15.5■□□□□ 0.07
SSBP4-209ENST00000601357 KCNS1Q96KK3 526 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 SGK494Q96LW2 274 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 TMEM167BQ9NRX6 74 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 LRP1BQ9NZR2 4599 aa15.5■□□□□ 0.07
SSBP4-209ENST00000601357 TRAV4A0A0B4J268 109 aa15.49■□□□□ 0.07
SSBP4-209ENST00000601357 C16orf90A8MZG2 172 aa15.49■□□□□ 0.07
SSBP4-209ENST00000601357 K7EQD1 137 aa15.49■□□□□ 0.07
SSBP4-209ENST00000601357 IGLV2-11P01706 119 aa15.49■□□□□ 0.07
SSBP4-209ENST00000601357 NEGR1Q7Z3B1 354 aa15.49■□□□□ 0.07
SSBP4-209ENST00000601357 ACTR3CQ9C0K3 210 aaPredicted RBP15.49■□□□□ 0.07
SSBP4-209ENST00000601357 SDF2L1Q9HCN8 221 aa15.49■□□□□ 0.07
SSBP4-209ENST00000601357 HSPG2P98160 4391 aa15.49■□□□□ 0.07
SSBP4-209ENST00000601357 G3V3Q6 166 aa15.48■□□□□ 0.07
SSBP4-209ENST00000601357 ZNF80P51504 273 aaPredicted RBP15.48■□□□□ 0.07
SSBP4-209ENST00000601357 LINC00315P59091 139 aa15.48■□□□□ 0.07
SSBP4-209ENST00000601357 SUMO1P63165 101 aaKnown RBP15.48■□□□□ 0.07
SSBP4-209ENST00000601357 Q6ZRN7 208 aaPredicted RBP15.48■□□□□ 0.07
SSBP4-209ENST00000601357 NDFIP1Q9BT67 221 aa15.48■□□□□ 0.07
SSBP4-209ENST00000601357 C11orf21Q9P2W6 132 aa15.48■□□□□ 0.07
SSBP4-209ENST00000601357 EPDR1Q9UM22 224 aa15.48■□□□□ 0.07
SSBP4-209ENST00000601357 ABCA13Q86UQ4 5058 aa15.48■□□□□ 0.07
SSBP4-209ENST00000601357 FXYD6-FXYD2A0A087WZ82 144 aa15.47■□□□□ 0.07
SSBP4-209ENST00000601357 K7EQM0 130 aa15.47■□□□□ 0.07
SSBP4-209ENST00000601357 ZNF726P1Q15940 193 aa15.47■□□□□ 0.07
SSBP4-209ENST00000601357 OR2T35Q8NGX2 323 aa15.47■□□□□ 0.07
SSBP4-209ENST00000601357 PSG8Q9UQ74 426 aa15.47■□□□□ 0.07
SSBP4-209ENST00000601357 BORCS7-ASMTA0A0B4J1R7 106 aa15.46■□□□□ 0.07
SSBP4-209ENST00000601357 ORM1P02763 201 aa15.46■□□□□ 0.07
SSBP4-209ENST00000601357 TMEM75Q8N9X5 138 aa15.46■□□□□ 0.07
SSBP4-209ENST00000601357 OR4C5Q8NGB2 326 aa15.46■□□□□ 0.07
SSBP4-209ENST00000601357 A0A1W2PRE2 83 aa15.45■□□□□ 0.06
SSBP4-209ENST00000601357 GYPEP15421 78 aa15.45■□□□□ 0.06
SSBP4-209ENST00000601357 SRIP30626 198 aa15.45■□□□□ 0.06
SSBP4-209ENST00000601357 FLI1Q01543 452 aaPredicted RBP15.45■□□□□ 0.06
SSBP4-209ENST00000601357 SPATA12Q7Z6I5 190 aa15.45■□□□□ 0.06
SSBP4-209ENST00000601357 CYB561D1Q8N8Q1 229 aa15.45■□□□□ 0.06
SSBP4-209ENST00000601357 TAAR5O14804 337 aa15.44■□□□□ 0.06
SSBP4-209ENST00000601357 CDK2AP2O75956 126 aa15.44■□□□□ 0.06
SSBP4-209ENST00000601357 PFN1P07737 140 aaKnown RBP15.44■□□□□ 0.06
SSBP4-209ENST00000601357 FBLL1A6NHQ2 334 aaKnown RBP15.43■□□□□ 0.06
SSBP4-209ENST00000601357 C9JCJ5 164 aa15.43■□□□□ 0.06
SSBP4-209ENST00000601357 GCGP01275 180 aa15.43■□□□□ 0.06
SSBP4-209ENST00000601357 RGS21Q2M5E4 152 aa15.43■□□□□ 0.06
SSBP4-209ENST00000601357 PCNPQ8WW12 178 aaKnown RBP15.43■□□□□ 0.06
SSBP4-209ENST00000601357 CTXND1A0A1B0GTU2 59 aa15.42■□□□□ 0.06
SSBP4-209ENST00000601357 KRTAP10-2P60368 255 aa15.42■□□□□ 0.06
SSBP4-209ENST00000601357 SMUG1Q53HV7 270 aa15.42■□□□□ 0.06
SSBP4-209ENST00000601357 PRNTQ86SH4 94 aa15.42■□□□□ 0.06
SSBP4-209ENST00000601357 GATA1P15976 413 aaPredicted RBP15.41■□□□□ 0.06
SSBP4-209ENST00000601357 ZNF876PQ49A33 203 aa15.41■□□□□ 0.06
SSBP4-209ENST00000601357 C9orf85Q96MD7 179 aa15.41■□□□□ 0.06
SSBP4-209ENST00000601357 TXNDC17Q9BRA2 123 aa15.41■□□□□ 0.06
SSBP4-209ENST00000601357 DNAH5Q8TE73 4624 aa15.4■□□□□ 0.06
SSBP4-209ENST00000601357 LOC100131303A0A0U1RQF7 123 aa15.4■□□□□ 0.06
SSBP4-209ENST00000601357 ZFP69Q49AA0 526 aa15.4■□□□□ 0.06
SSBP4-209ENST00000601357 SAPCD1Q5SSQ6 148 aa15.4■□□□□ 0.06
SSBP4-209ENST00000601357 WFDC10BQ8IUB3 73 aa15.4■□□□□ 0.06
SSBP4-209ENST00000601357 PTH2Q96A98 100 aa15.4■□□□□ 0.06
SSBP4-209ENST00000601357 LINC00479Q96M42 142 aa15.4■□□□□ 0.06
SSBP4-209ENST00000601357 APOBP04114 4563 aaKnown RBP15.4■□□□□ 0.06
SSBP4-209ENST00000601357 DPPA3Q6W0C5 159 aa15.39■□□□□ 0.05
SSBP4-209ENST00000601357 CYTL1Q9NRR1 136 aa15.39■□□□□ 0.05
SSBP4-209ENST00000601357 LY96Q9Y6Y9 160 aa15.39■□□□□ 0.05
SSBP4-209ENST00000601357 K7EP13 123 aa15.38■□□□□ 0.05
SSBP4-209ENST00000601357 RS1O15537 224 aa15.38■□□□□ 0.05
SSBP4-209ENST00000601357 RNASE3P12724 160 aaKnown RBP15.38■□□□□ 0.05
SSBP4-209ENST00000601357 CFAP126Q5VTH2 177 aa15.38■□□□□ 0.05
SSBP4-209ENST00000601357 SH2D6Q7Z4S9 175 aa15.38■□□□□ 0.05
SSBP4-209ENST00000601357 KRTAP4-5Q9BYR2 181 aa15.38■□□□□ 0.05
SSBP4-209ENST00000601357 TNFRSF18Q9Y5U5 241 aa15.38■□□□□ 0.05
SSBP4-209ENST00000601357 TRAV9-2A0A087WT02 112 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 TRAV34A0A0B4J273 112 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 FAM74A7A6NL05 159 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 ARPC5O15511 151 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 CIDEAO60543 219 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 DNAH10OSP0CZ25 163 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 TIRAPP58753 221 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 AKR1C8PQ5T2L2 129 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 ARL2-SNX15V9GYD0 113 aa15.37■□□□□ 0.05
SSBP4-209ENST00000601357 FGF8P55075 233 aaPredicted RBP15.36■□□□□ 0.05
SSBP4-209ENST00000601357 UBE2G2P60604 165 aa15.36■□□□□ 0.05
SSBP4-209ENST00000601357 SLC25A29Q8N8R3 303 aa15.36■□□□□ 0.05
SSBP4-209ENST00000601357 NKX6-2Q9C056 277 aaPredicted RBP15.36■□□□□ 0.05
SSBP4-209ENST00000601357 IGKV3D-20A0A0C4DH25 116 aa15.35■□□□□ 0.05
SSBP4-209ENST00000601357 PGPEP1LA6NFU8 196 aa15.35■□□□□ 0.05
SSBP4-209ENST00000601357 PEX7O00628 323 aa15.35■□□□□ 0.05
SSBP4-209ENST00000601357 IFNA7P01567 189 aa15.35■□□□□ 0.05
SSBP4-209ENST00000601357 ZNF506Q5JVG8 444 aa15.35■□□□□ 0.05
SSBP4-209ENST00000601357 Q86TA4 180 aa15.35■□□□□ 0.05
SSBP4-209ENST00000601357 NFE4Q86UQ8 179 aa15.35■□□□□ 0.05
SSBP4-209ENST00000601357 TRBV6-4A0A1B0GX49 114 aa15.34■□□□□ 0.05
SSBP4-209ENST00000601357 PPT1P50897 306 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms