RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
SHKBP1-226ENST00000600791 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
SHKBP1-226ENST00000600791 GYPEP15421 78 aa10.24□□□□□ -0.77
SHKBP1-226ENST00000600791 PCNPQ8WW12 178 aaKnown RBP10.24□□□□□ -0.77
SHKBP1-226ENST00000600791 ORM1P02763 201 aa10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 WFDC10BQ8IUB3 73 aa10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 OR4C5Q8NGB2 326 aa10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 SGK494Q96LW2 274 aa10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 AQP10Q96PS8 301 aa10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 SDF2L1Q9HCN8 221 aa10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 TNFRSF18Q9Y5U5 241 aa10.23□□□□□ -0.77
SHKBP1-226ENST00000600791 C9JCJ5 164 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 PTTG1O95997 202 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 TCRAP04437 139 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 ATP6V0CP27449 155 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 GCHFRP30047 84 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 C5orf17Q8NAS9 161 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 SUN5Q8TC36 379 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 RAB24Q969Q5 203 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 KCNS1Q96KK3 526 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 LY96Q9Y6Y9 160 aa10.22□□□□□ -0.77
SHKBP1-226ENST00000600791 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.77
SHKBP1-226ENST00000600791 ASB13Q8WXK3 278 aa10.21□□□□□ -0.77
SHKBP1-226ENST00000600791 TXNDC17Q9BRA2 123 aa10.21□□□□□ -0.77
SHKBP1-226ENST00000600791 NDFIP1Q9BT67 221 aa10.21□□□□□ -0.77
SHKBP1-226ENST00000600791 MED28Q9H204 178 aa10.21□□□□□ -0.77
SHKBP1-226ENST00000600791 SH3BGRL3Q9H299 93 aa10.21□□□□□ -0.77
SHKBP1-226ENST00000600791 TRAV9-2A0A087WT02 112 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 LOC100131303A0A0U1RQF7 123 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 GGTLC3B5MD39 225 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 ZNF80P51504 273 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 ERVFC1-1P60608 527 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 SERF2P84101 59 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 Q5BKY6 102 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 NFE4Q86UQ8 179 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 Q8N1X5 172 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 C11orf21Q9P2W6 132 aa10.2□□□□□ -0.78
SHKBP1-226ENST00000600791 IGLV2-11P01706 119 aa10.19□□□□□ -0.78
SHKBP1-226ENST00000600791 MBP02144 154 aa10.19□□□□□ -0.78
SHKBP1-226ENST00000600791 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
SHKBP1-226ENST00000600791 TMEM167BQ9NRX6 74 aa10.19□□□□□ -0.78
SHKBP1-226ENST00000600791 PSG8Q9UQ74 426 aa10.19□□□□□ -0.78
SHKBP1-226ENST00000600791 K7EP13 123 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 K7EQM0 130 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 CXorf1O96002 111 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 GCGP01275 180 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 GATA1P15976 413 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 EVI2AP22794 236 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 FUSP35637 526 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 SUMO1P63165 101 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 TMEM75Q8N9X5 138 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 MSRB1Q9NZV6 116 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 TNFSF18Q9UNG2 199 aa10.18□□□□□ -0.78
SHKBP1-226ENST00000600791 RNF222A6NCQ9 220 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 FBLL1A6NHQ2 334 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 TAAR5O14804 337 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 EREGO14944 169 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 PFN1P07737 140 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 GIPP09681 153 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 FLI1Q01543 452 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 ZNF876PQ49A33 203 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 ZFP69Q49AA0 526 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 DPPA3Q6W0C5 159 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 CYB561D1Q8N8Q1 229 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 NHLRC2Q8NBF2 726 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 ACTR3CQ9C0K3 210 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 SCRT2Q9NQ03 307 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 EPDR1Q9UM22 224 aa10.17□□□□□ -0.78
SHKBP1-226ENST00000600791 A0A087WTM6 91 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 CRYGDP07320 174 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 TIRAPP58753 221 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 SMUG1Q53HV7 270 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 CFAP126Q5VTH2 177 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 RPL7L1Q6DKI1 246 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 SH2D6Q7Z4S9 175 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 PRNTQ86SH4 94 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 SLC25A29Q8N8R3 303 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 C9orf85Q96MD7 179 aa10.16□□□□□ -0.78
SHKBP1-226ENST00000600791 RS1O15537 224 aa10.15□□□□□ -0.78
SHKBP1-226ENST00000600791 PPT1P50897 306 aa10.15□□□□□ -0.78
SHKBP1-226ENST00000600791 ZNF726P1Q15940 193 aa10.15□□□□□ -0.78
SHKBP1-226ENST00000600791 INO80EQ8NBZ0 244 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-226ENST00000600791 FAT1Q14517 4588 aa10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 FXYD6-FXYD2A0A087WZ82 144 aa10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 A0A1W2PRE2 83 aa10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 RHOHQ15669 191 aa10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 ZNF506Q5JVG8 444 aa10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 C10orf126Q8N4M7 172 aa10.14□□□□□ -0.79
SHKBP1-226ENST00000600791 BORCS7-ASMTA0A0B4J1R7 106 aa10.13□□□□□ -0.79
SHKBP1-226ENST00000600791 IGHV3-73A0A0B4J1V6 119 aa10.13□□□□□ -0.79
SHKBP1-226ENST00000600791 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
SHKBP1-226ENST00000600791 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
SHKBP1-226ENST00000600791 CIDEAO60543 219 aa10.13□□□□□ -0.79
SHKBP1-226ENST00000600791 SAPCD1Q5SSQ6 148 aa10.13□□□□□ -0.79
SHKBP1-226ENST00000600791 PTH2Q96A98 100 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms