RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 TMEM170BQ5T4T1 132 aa9.59□□□□□ -0.87
USHBP1-207ENST00000597928 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
USHBP1-207ENST00000597928 A0A0G2JLM5 398 aa9.59□□□□□ -0.87
USHBP1-207ENST00000597928 TAX1BP3O14907 124 aa9.59□□□□□ -0.87
USHBP1-207ENST00000597928 AMTNQ6UX39 209 aa9.59□□□□□ -0.87
USHBP1-207ENST00000597928 C8orf31Q8N9H6 132 aa9.59□□□□□ -0.87
USHBP1-207ENST00000597928 OR4X2Q8NGF9 303 aa9.59□□□□□ -0.87
USHBP1-207ENST00000597928 DUX3Q96PT4 197 aa9.59□□□□□ -0.87
USHBP1-207ENST00000597928 IGHV4-61A0A0C4DH41 118 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 IGKCP01834 107 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 FABP2P12104 132 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 PSMG4Q5JS54 123 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 LYPD1Q8N2G4 141 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 WI2-2373I1.2A0A1W2PRP0 233 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 FAM159AQ6UWV7 190 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 JPT2Q9H910 190 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 IGHV2-70DA0A0C4DH43 119 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 LY6LH3BQJ8 138 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 BUB3O43684 328 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 COX8AP10176 69 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 UCNP55089 124 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 GAGE1Q13065 139 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 Q6ZS46 218 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 RHPN1-AS1Q9BWJ2 59 aa9.58□□□□□ -0.88
USHBP1-207ENST00000597928 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 SMAD7O15105 426 aaKnown RBP9.57□□□□□ -0.88
USHBP1-207ENST00000597928 SCGB1C2P0DMR2 95 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 ASIPP42127 132 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 IGF2-ASQ6U949 168 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 HRNRQ86YZ3 2850 aaPredicted RBP9.57□□□□□ -0.88
USHBP1-207ENST00000597928 DOPEY1Q5JWR5 2465 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 CENPVL3A0A0U1RRI6 287 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 EDN2P20800 178 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 CST9LQ9H4G1 147 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 KLK9Q9UKQ9 250 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
USHBP1-207ENST00000597928 PRB1P04280 392 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 UBE2E1P51965 193 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 C10orf99Q6UWK7 81 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 NPFFR1Q9GZQ6 430 aa9.57□□□□□ -0.88
USHBP1-207ENST00000597928 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 PDE6HQ13956 83 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 PIMREGQ9BSJ6 248 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 BEX4Q9NWD9 120 aaPredicted RBP9.56□□□□□ -0.88
USHBP1-207ENST00000597928 C11orf21Q9P2W6 132 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 K7ERU9 68 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 DPM2O94777 84 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 ZNF418Q8TF45 676 aaPredicted RBP9.56□□□□□ -0.88
USHBP1-207ENST00000597928 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
USHBP1-207ENST00000597928 IGKV2D-26A0A0A0MRZ7 120 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 OR11H2Q8NH07 326 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 FAM110DQ8TAY7 271 aaPredicted RBP9.55□□□□□ -0.88
USHBP1-207ENST00000597928 MS4A6AQ9H2W1 248 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 Q1RN00 199 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 MINOS1Q5TGZ0 78 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 NPBQ8NG41 125 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 MINOS1-NBL1R4GNA1 71 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 A0A1B0GW15 77 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 LAGE3Q14657 143 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 LINC01545Q5VT33 79 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 SLC50A1Q9BRV3 221 aa9.55□□□□□ -0.88
USHBP1-207ENST00000597928 F8W735 103 aaPredicted RBP9.54□□□□□ -0.88
USHBP1-207ENST00000597928 OR1N2Q8NGR9 330 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 MOB4Q9Y3A3 225 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 A0A0U1RRA0 63 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 IGHV4-39P01824 125 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 PRSS2P07478 247 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 NPC2P61916 151 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 SAMD5Q5TGI4 173 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
USHBP1-207ENST00000597928 COL27A1Q8IZC6 1860 aaPredicted RBP9.54□□□□□ -0.88
USHBP1-207ENST00000597928 SPINK13Q1W4C9 94 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 CHAC1Q9BUX1 264 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 CSTL1Q9H114 145 aa9.54□□□□□ -0.88
USHBP1-207ENST00000597928 FXYD2P54710 66 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 SYNJ2BPP57105 145 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 DEFB136Q30KP8 78 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 RNASE13Q5GAN3 156 aaKnown RBP9.53□□□□□ -0.88
USHBP1-207ENST00000597928 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 IGHV4-30-2A0A087WSY4 118 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 CD5LO43866 347 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 RBX1P62877 108 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 NPIPB6E9PJ23 425 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 PRM2P04554 102 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 SRSF1Q07955 248 aaKnown RBP eCLIP9.53□□□□□ -0.88
USHBP1-207ENST00000597928 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
USHBP1-207ENST00000597928 DEFB125Q8N687 156 aa9.52□□□□□ -0.89
USHBP1-207ENST00000597928 KLHL30-AS1Q8NEE0 82 aa9.52□□□□□ -0.89
USHBP1-207ENST00000597928 FASNP49327 2511 aaKnown RBP9.52□□□□□ -0.89
USHBP1-207ENST00000597928 PRR9Q5T870 116 aa9.52□□□□□ -0.89
USHBP1-207ENST00000597928 C20orf173Q96LM9 149 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms