RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 SH2D1AO60880 128 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 APOC3P02656 99 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 ERVFC1-1P60608 527 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 OR5I1Q13606 314 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 C10orf91Q5T1B1 145 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 Q6AWC8 147 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 SVBPQ8N300 66 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 C15orf54Q8N8G6 183 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 ISOC2Q96AB3 205 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 C20orf144Q9BQM9 153 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 TMEM208Q9BTX3 173 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 NAGKQ9UJ70 344 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 GOLT1BQ9Y3E0 138 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 UBE2CO00762 179 aa8.78□□□□□ -1
SHKBP1-213ENST00000597325 P01737 135 aa8.78□□□□□ -1
SHKBP1-213ENST00000597325 FRMD6-AS1P0C7T7 363 aa8.78□□□□□ -1
SHKBP1-213ENST00000597325 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
SHKBP1-213ENST00000597325 KIR3DS1Q14943 382 aa8.78□□□□□ -1
SHKBP1-213ENST00000597325 IBA57Q5T440 356 aaKnown RBP8.78□□□□□ -1
SHKBP1-213ENST00000597325 TMEM256Q8N2U0 113 aa8.78□□□□□ -1
SHKBP1-213ENST00000597325 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
SHKBP1-213ENST00000597325 SORL1Q92673 2214 aa8.78□□□□□ -1
SHKBP1-213ENST00000597325 B4DEV8 164 aa8.77□□□□□ -1.01
SHKBP1-213ENST00000597325 CRXO43186 299 aaPredicted RBP8.77□□□□□ -1.01
SHKBP1-213ENST00000597325 ATP6V1G1O75348 118 aa8.77□□□□□ -1.01
SHKBP1-213ENST00000597325 SNAPINO95295 136 aa8.77□□□□□ -1.01
SHKBP1-213ENST00000597325 FAM159AQ6UWV7 190 aa8.77□□□□□ -1.01
SHKBP1-213ENST00000597325 SFRP2Q96HF1 295 aa8.77□□□□□ -1.01
SHKBP1-213ENST00000597325 RNASE7Q9H1E1 156 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-213ENST00000597325 IGHV3OR16-12A0A075B7B8 117 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 ZNF705GA8MUZ8 300 aaPredicted RBP8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 H7BYZ3 331 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 ORM1P02763 201 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 MT-ND4LP03901 98 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 RHEBQ15382 184 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 CLRN3Q8NCR9 226 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 OR10G8Q8NGN5 311 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 LINC01587Q99440 93 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 RPP21Q9H633 154 aaKnown RBP8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
SHKBP1-213ENST00000597325 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 XKRY2A2RUG3 117 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 PPP1R2P9O14990 202 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 ZNF324O75467 553 aaPredicted RBP8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 GIG44P09565 113 aaPredicted RBP8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 S100A1P23297 94 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 CRIP1P50238 77 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 DEFB135Q30KP9 77 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 MUC21Q5SSG8 566 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 LINC00322Q6ZN03 302 aaPredicted RBP8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 OR2D3Q8NGH3 330 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 KCNS1Q96KK3 526 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 PYGO2Q9BRQ0 406 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 AGRNO00468 2067 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
SHKBP1-213ENST00000597325 DNAH17Q9UFH2 4485 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 IGHV1OR15-1A0A075B7D0 117 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 TMSB15BA0A087X1C1 80 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 HTN1P15515 57 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 RPS20P60866 119 aaKnown RBP8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 RNF212Q495C1 297 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 Q6ZWC4 215 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 NUDT10Q8NFP7 164 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 ANAPC16Q96DE5 110 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 NUDT11Q96G61 164 aa8.74□□□□□ -1.01
SHKBP1-213ENST00000597325 PKD1P98161 4303 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 CBY3A6NI87 242 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 ASIPP42127 132 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 Q6ZQT7 251 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 C1orf158Q8N1D5 194 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 CSNK1G2-AS1Q8NCQ2 148 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 RPS10P5Q9NQ39 176 aa8.73□□□□□ -1.01
SHKBP1-213ENST00000597325 C7orf77A4D0Y5 90 aa8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 A8MWL6 223 aa8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 S100A4P26447 101 aaKnown RBP8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 RPL19P84098 196 aaKnown RBP8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 CT83Q5H943 113 aa8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 LINC00467Q9BRT7 94 aa8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 CTDSP1Q9GZU7 261 aa8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 C11orf21Q9P2W6 132 aa8.72□□□□□ -1.01
SHKBP1-213ENST00000597325 A0A087WWC5 75 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 SPRY2O43597 315 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 LY6G6CO95867 125 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 TYMSP04818 313 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 CXCL1P09341 107 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms