RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 OCC1Q8TAD7 63 aa16.14■□□□□ 0.18
SNRNP70-204ENST00000595231 ZNF575Q86XF7 245 aa16.14■□□□□ 0.17
SNRNP70-204ENST00000595231 SMIM7Q9BQ49 75 aa16.14■□□□□ 0.17
SNRNP70-204ENST00000595231 DNAH7Q8WXX0 4024 aa16.13■□□□□ 0.17
SNRNP70-204ENST00000595231 MGST1P10620 155 aaKnown RBP16.13■□□□□ 0.17
SNRNP70-204ENST00000595231 PRR27Q6MZM9 219 aa16.13■□□□□ 0.17
SNRNP70-204ENST00000595231 KCNS1Q96KK3 526 aa16.13■□□□□ 0.17
SNRNP70-204ENST00000595231 MDFICQ9P1T7 246 aa16.13■□□□□ 0.17
SNRNP70-204ENST00000595231 CELA1Q9UNI1 258 aa16.13■□□□□ 0.17
SNRNP70-204ENST00000595231 ZNF727A8MUV8 499 aa16.12■□□□□ 0.17
SNRNP70-204ENST00000595231 K7EN84 100 aa16.12■□□□□ 0.17
SNRNP70-204ENST00000595231 TYMSP04818 313 aa16.12■□□□□ 0.17
SNRNP70-204ENST00000595231 GSN-AS1Q9NRJ2 163 aa16.12■□□□□ 0.17
SNRNP70-204ENST00000595231 IBA57Q5T440 356 aaKnown RBP16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 SDF2L1Q9HCN8 221 aa16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 DKK2Q9UBU2 259 aa16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 LINC00862A6NCI5 91 aa16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 ORM1P02763 201 aa16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 OR5I1Q13606 314 aa16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 IL17DQ8TAD2 202 aa16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 TIMM8BQ9Y5J9 83 aaPredicted RBP16.11■□□□□ 0.17
SNRNP70-204ENST00000595231 IGHV3-16A0A0C4DH30 117 aa16.1■□□□□ 0.17
SNRNP70-204ENST00000595231 C19orf71A6NCJ1 209 aa16.1■□□□□ 0.17
SNRNP70-204ENST00000595231 KRBOX1C9JBD0 128 aa16.1■□□□□ 0.17
SNRNP70-204ENST00000595231 LINC01559Q495D7 138 aa16.1■□□□□ 0.17
SNRNP70-204ENST00000595231 FAM74A3Q4VXF1 159 aa16.1■□□□□ 0.17
SNRNP70-204ENST00000595231 FAM222AQ5U5X8 452 aa16.1■□□□□ 0.17
SNRNP70-204ENST00000595231 LY96Q9Y6Y9 160 aa16.1■□□□□ 0.17
SNRNP70-204ENST00000595231 TRGV11A0A075B6L2 103 aa16.09■□□□□ 0.17
SNRNP70-204ENST00000595231 M0R036 132 aa16.09■□□□□ 0.17
SNRNP70-204ENST00000595231 TCL1AP56279 114 aa16.09■□□□□ 0.17
SNRNP70-204ENST00000595231 NOP10Q9NPE3 64 aaKnown RBP16.09■□□□□ 0.17
SNRNP70-204ENST00000595231 B4DEV8 164 aa16.08■□□□□ 0.17
SNRNP70-204ENST00000595231 SPART-AS1P0CW21 52 aa16.08■□□□□ 0.17
SNRNP70-204ENST00000595231 DAZ2Q13117 558 aaKnown RBP16.08■□□□□ 0.17
SNRNP70-204ENST00000595231 SOHLH1Q5JUK2 328 aa16.08■□□□□ 0.17
SNRNP70-204ENST00000595231 SNURFLB1AK76 121 aa16.08■□□□□ 0.16
SNRNP70-204ENST00000595231 LINC01551Q86U37 167 aa16.08■□□□□ 0.16
SNRNP70-204ENST00000595231 C11orf45Q8TAV5 145 aa16.08■□□□□ 0.16
SNRNP70-204ENST00000595231 CXorf65A6NEN9 183 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 LYRM9A8MSI8 78 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 SFTA3P0C7M3 94 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 RPL19P84098 196 aaKnown RBP16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 ZNF415Q09FC8 603 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 UQCC3Q6UW78 93 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 COMMD7Q86VX2 200 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 WWC2-AS2Q96NR7 200 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 BIN3Q9NQY0 253 aa16.07■□□□□ 0.16
SNRNP70-204ENST00000595231 TMEM241Q24JQ0 296 aa16.06■□□□□ 0.16
SNRNP70-204ENST00000595231 RNASE3P12724 160 aaKnown RBP16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 NANOS2P60321 138 aaKnown RBP16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 C12orf74Q32Q52 190 aa16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 TMSB15BA0A087X1C1 80 aa16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 DNLZQ5SXM8 178 aa16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 NUDT10Q8NFP7 164 aa16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 DAZAP1Q96EP5 407 aaKnown RBP16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 NUDT11Q96G61 164 aa16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 NAT8Q9UHE5 227 aa16.05■□□□□ 0.16
SNRNP70-204ENST00000595231 GRIFINA4D1Z8 144 aa16.04■□□□□ 0.16
SNRNP70-204ENST00000595231 SPINK4O60575 86 aa16.04■□□□□ 0.16
SNRNP70-204ENST00000595231 LINC00612Q8N6U2 182 aa16.04■□□□□ 0.16
SNRNP70-204ENST00000595231 RNASE7Q9H1E1 156 aaKnown RBP16.04■□□□□ 0.16
SNRNP70-204ENST00000595231 TEX48A0A1B0GUV7 120 aa16.03■□□□□ 0.16
SNRNP70-204ENST00000595231 C9orf85Q96MD7 179 aa16.03■□□□□ 0.16
SNRNP70-204ENST00000595231 CSMD3Q7Z407 3707 aa16.03■□□□□ 0.16
SNRNP70-204ENST00000595231 ASIPP42127 132 aa16.02■□□□□ 0.16
SNRNP70-204ENST00000595231 RPL23P62829 140 aaKnown RBP16.02■□□□□ 0.16
SNRNP70-204ENST00000595231 Q6ZTI0 123 aa16.02■□□□□ 0.16
SNRNP70-204ENST00000595231 SPXQ9BT56 116 aa16.02■□□□□ 0.16
SNRNP70-204ENST00000595231 MUC4Q99102 2169 aa16.02■□□□□ 0.15
SNRNP70-204ENST00000595231 P01737 135 aa16.02■□□□□ 0.15
SNRNP70-204ENST00000595231 DEFB130BP0DP73 79 aa16.02■□□□□ 0.15
SNRNP70-204ENST00000595231 DEFB130AP0DP74 79 aa16.02■□□□□ 0.15
SNRNP70-204ENST00000595231 LGALS9BQ3B8N2 356 aa16.01■□□□□ 0.15
SNRNP70-204ENST00000595231 Q6ZTC4 211 aa16.01■□□□□ 0.15
SNRNP70-204ENST00000595231 FAM231DQ6ZW35 169 aa16.01■□□□□ 0.15
SNRNP70-204ENST00000595231 OR2D3Q8NGH3 330 aa16.01■□□□□ 0.15
SNRNP70-204ENST00000595231 IL36BQ9NZH7 164 aa16.01■□□□□ 0.15
SNRNP70-204ENST00000595231 TMEM218A2RU14 115 aa16■□□□□ 0.15
SNRNP70-204ENST00000595231 CXCL1P09341 107 aa16■□□□□ 0.15
SNRNP70-204ENST00000595231 S100A4P26447 101 aaKnown RBP16■□□□□ 0.15
SNRNP70-204ENST00000595231 DAD1P61803 113 aa16■□□□□ 0.15
SNRNP70-204ENST00000595231 MRPL16Q9NX20 251 aaKnown RBP16■□□□□ 0.15
SNRNP70-204ENST00000595231 TRGV1A0A0A0MS02 117 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 GAGE12BA1L429 117 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 GAGE7O76087 117 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 ARMS2P0C7Q2 107 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 GAGE12FP0CL80 117 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 GAGE12GP0CL81 117 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 GAGE12IP0CL82 117 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 RASL10AQ92737 203 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 ISOC2Q96AB3 205 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 H3BVH4 76 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 M0R2P5 195 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 ERVFC1-1P60608 527 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 SCRT2Q9NQ03 307 aa15.99■□□□□ 0.15
SNRNP70-204ENST00000595231 GZMBP10144 247 aa15.98■□□□□ 0.15
SNRNP70-204ENST00000595231 ADCYAP1P18509 176 aa15.98■□□□□ 0.15
SNRNP70-204ENST00000595231 ADIRFQ15847 76 aa15.98■□□□□ 0.15
SNRNP70-204ENST00000595231 MUC7Q8TAX7 377 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms