RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 CEACAM4O75871 244 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 LINC01560Q8TB33 94 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 PRO3102Q9H379 93 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 IGHV3-49A0A0A0MS15 119 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 TEX49A0A1B0GTD5 131 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 DKK1O94907 266 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 IGHG4P01861 327 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 PDE6HQ13956 83 aa9.68□□□□□ -0.86
LIG1-207ENST00000594759 C14orf178Q8N769 122 aaPredicted RBP9.68□□□□□ -0.86
LIG1-207ENST00000594759 K7EM74 188 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 PLA2G2CQ5R387 149 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 SLC50A1Q9BRV3 221 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 J3QQQ9 107 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 C17orf58Q2M2W7 97 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 PLEKHB2Q96CS7 222 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 CCDC168Q8NDH2 2452 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 LINC00694P0DN24 101 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 HERVK_113P63121 156 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 PIFOQ8TCI5 191 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 DNAJC30Q96LL9 226 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
LIG1-207ENST00000594759 ASCL5Q7RTU5 278 aa9.66□□□□□ -0.86
LIG1-207ENST00000594759 C11orf53Q8IXP5 236 aa9.66□□□□□ -0.86
LIG1-207ENST00000594759 MRPL36Q9P0J6 103 aaKnown RBP9.66□□□□□ -0.86
LIG1-207ENST00000594759 SMIM9A6NGZ8 99 aa9.66□□□□□ -0.86
LIG1-207ENST00000594759 ERCC8Q13216 396 aa9.66□□□□□ -0.86
LIG1-207ENST00000594759 DUX4L9Q6RFH8 374 aaPredicted RBP9.66□□□□□ -0.86
LIG1-207ENST00000594759 THBDP07204 575 aa9.66□□□□□ -0.86
LIG1-207ENST00000594759 NUP37Q8NFH4 326 aa9.66□□□□□ -0.86
LIG1-207ENST00000594759 SPRY4Q9C004 299 aa9.66□□□□□ -0.86
LIG1-207ENST00000594759 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.86
LIG1-207ENST00000594759 A0A1W2PNU3 283 aaPredicted RBP9.65□□□□□ -0.86
LIG1-207ENST00000594759 PHLDA1Q8WV24 401 aaPredicted RBP9.65□□□□□ -0.86
LIG1-207ENST00000594759 UQCRQO14949 82 aa9.65□□□□□ -0.86
LIG1-207ENST00000594759 SRD5A1P18405 259 aa9.65□□□□□ -0.86
LIG1-207ENST00000594759 WT1P19544 449 aaPredicted RBP9.65□□□□□ -0.86
LIG1-207ENST00000594759 HIST1H4AP62805 103 aaKnown RBP9.65□□□□□ -0.86
LIG1-207ENST00000594759 Q6ZQT7 251 aa9.65□□□□□ -0.86
LIG1-207ENST00000594759 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
LIG1-207ENST00000594759 DUSP14O95147 198 aaKnown RBP9.65□□□□□ -0.87
LIG1-207ENST00000594759 METTL26Q96S19 204 aa9.65□□□□□ -0.87
LIG1-207ENST00000594759 C7orf69Q9H7B7 122 aa9.65□□□□□ -0.87
LIG1-207ENST00000594759 LINC00527Q9UJ94 153 aa9.64□□□□□ -0.87
LIG1-207ENST00000594759 TP53TG1Q9Y2A0 90 aa9.64□□□□□ -0.87
LIG1-207ENST00000594759 SS18L1O75177 396 aaPredicted RBP9.64□□□□□ -0.87
LIG1-207ENST00000594759 TRBV7-3A0A075B6L6 115 aa9.64□□□□□ -0.87
LIG1-207ENST00000594759 A0A096LNJ9 63 aa9.64□□□□□ -0.87
LIG1-207ENST00000594759 Q6Q795 121 aa9.64□□□□□ -0.87
LIG1-207ENST00000594759 SIGLEC15Q6ZMC9 328 aa9.64□□□□□ -0.87
LIG1-207ENST00000594759 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
LIG1-207ENST00000594759 A0A0U1RRA0 63 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 NDUFA7O95182 113 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 ACYP1P07311 99 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 ECSCRQ19T08 205 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 RS1O15537 224 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 MYCNOSP40205 109 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 TPSG1Q9NRR2 321 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 IGHV1-18A0A0C4DH31 117 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 C3orf22Q8N5N4 141 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 BSPH1Q075Z2 132 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 ZNF474Q6S9Z5 364 aaPredicted RBP9.63□□□□□ -0.87
LIG1-207ENST00000594759 SIGLEC9Q9Y336 463 aa9.63□□□□□ -0.87
LIG1-207ENST00000594759 WI2-2373I1.2A0A1W2PRP0 233 aa9.62□□□□□ -0.87
LIG1-207ENST00000594759 TIMM23O14925 209 aa9.62□□□□□ -0.87
LIG1-207ENST00000594759 CSDC2Q9Y534 153 aaKnown RBP9.62□□□□□ -0.87
LIG1-207ENST00000594759 IGKV1D-37A0A075B6S9 117 aa9.62□□□□□ -0.87
LIG1-207ENST00000594759 E7EUB6 86 aa9.62□□□□□ -0.87
LIG1-207ENST00000594759 UTF1Q5T230 341 aa9.62□□□□□ -0.87
LIG1-207ENST00000594759 PRO0461Q9UI25 63 aa9.62□□□□□ -0.87
LIG1-207ENST00000594759 MUC22E2RYF6 1773 aaPredicted RBP9.62□□□□□ -0.87
LIG1-207ENST00000594759 H3BRN7 92 aa9.62□□□□□ -0.87
LIG1-207ENST00000594759 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 VCYO14598 125 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 DIAPH2-AS1Q14236 149 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 DUX5Q96PT3 197 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 U3KQK5 164 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 LYNX1G3V0Z9 82 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 LYNX1P0DP58 116 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 MUSTN1Q8IVN3 82 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 SLC25A15Q9Y619 301 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 TRAV41A0A0B4J266 112 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 CRLF1O75462 422 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 WISP2O76076 250 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 PRR30Q53SZ7 412 aaPredicted RBP9.61□□□□□ -0.87
LIG1-207ENST00000594759 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
LIG1-207ENST00000594759 OOSP1A8MZH6 123 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 HTN1P15515 57 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 TRAV21A0A0B4J279 112 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 F5H768 121 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 ATOX1O00244 68 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 INAFM2P0DMQ5 153 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 AJUBAQ96IF1 538 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 UCNP55089 124 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 LY6DQ14210 128 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 C1orf229Q6ZS94 237 aaPredicted RBP9.6□□□□□ -0.87
LIG1-207ENST00000594759 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
LIG1-207ENST00000594759 H3BT86 120 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 3171.2 ms