RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 AGRNO00468 2067 aa11.13□□□□□ -0.63
FOXA3-202ENST00000594297 TRAV21A0A0B4J279 112 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 C7orf71A4D174 169 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 IGLL5B9A064 214 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 J3KRW8 73 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 ADIRFQ15847 76 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 FAM162BQ5T6X4 162 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 AMTNQ6UX39 209 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 NHLRC2Q8NBF2 726 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 FAM19A4Q96LR4 140 aa11.12□□□□□ -0.63
FOXA3-202ENST00000594297 TRBV20OR9-2A0A075B6H5 130 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 M0R036 132 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 M0R2Z0 102 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 DEFB4AO15263 64 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 CA1P00915 261 aaPredicted RBP11.11□□□□□ -0.63
FOXA3-202ENST00000594297 PRR27Q6MZM9 219 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 TMEM208Q9BTX3 173 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 MLST8Q9BVC4 326 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 SDF2L1Q9HCN8 221 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 GOLT1BQ9Y3E0 138 aa11.11□□□□□ -0.63
FOXA3-202ENST00000594297 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 KLLNB2CW77 178 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 B4DEV8 164 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 APOC3P02656 99 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 PFN1P07737 140 aaKnown RBP11.1□□□□□ -0.63
FOXA3-202ENST00000594297 FXYD7P58549 80 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 SVBPQ8N300 66 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 ZFAND2AQ8N6M9 145 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 OR11H2Q8NH07 326 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 XCL2Q9UBD3 114 aa11.1□□□□□ -0.63
FOXA3-202ENST00000594297 CARHSP1Q9Y2V2 147 aaKnown RBP11.1□□□□□ -0.63
FOXA3-202ENST00000594297 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
FOXA3-202ENST00000594297 PGPEP1LA6NFU8 196 aa11.09□□□□□ -0.63
FOXA3-202ENST00000594297 P01737 135 aa11.09□□□□□ -0.63
FOXA3-202ENST00000594297 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
FOXA3-202ENST00000594297 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
FOXA3-202ENST00000594297 RPL23P62829 140 aaKnown RBP11.09□□□□□ -0.63
FOXA3-202ENST00000594297 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
FOXA3-202ENST00000594297 TRAV12-2A0A075B6T6 113 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 PPP1R2P9O14990 202 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 RTL8CO15255 209 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 SNAPINO95295 136 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 IGLV2-8P01709 118 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 S100A1P23297 94 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
FOXA3-202ENST00000594297 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 Q6AWC8 147 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 FAM159AQ6UWV7 190 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 KCNS1Q96KK3 526 aa11.08□□□□□ -0.64
FOXA3-202ENST00000594297 H7BYZ3 331 aa11.07□□□□□ -0.64
FOXA3-202ENST00000594297 ORM1P02763 201 aa11.07□□□□□ -0.64
FOXA3-202ENST00000594297 ADCYAP1P18509 176 aa11.07□□□□□ -0.64
FOXA3-202ENST00000594297 RPS20P60866 119 aaKnown RBP11.07□□□□□ -0.64
FOXA3-202ENST00000594297 BTN1A1Q13410 526 aa11.07□□□□□ -0.64
FOXA3-202ENST00000594297 OR5I1Q13606 314 aa11.07□□□□□ -0.64
FOXA3-202ENST00000594297 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
FOXA3-202ENST00000594297 LINC01587Q99440 93 aa11.07□□□□□ -0.64
FOXA3-202ENST00000594297 TMEM189A5PLL7 270 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 GATCO43716 136 aaKnown RBP11.06□□□□□ -0.64
FOXA3-202ENST00000594297 SH2D1AO60880 128 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 OR10G8Q8NGN5 311 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 ISOC2Q96AB3 205 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 PYGO2Q9BRQ0 406 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 OSTCQ9NRP0 149 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 NAGKQ9UJ70 344 aa11.06□□□□□ -0.64
FOXA3-202ENST00000594297 IGHV4-4A0A075B6R2 117 aa11.05□□□□□ -0.64
FOXA3-202ENST00000594297 ZNF705GA8MUZ8 300 aaPredicted RBP11.05□□□□□ -0.64
FOXA3-202ENST00000594297 K7EN84 100 aa11.05□□□□□ -0.64
FOXA3-202ENST00000594297 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
FOXA3-202ENST00000594297 RHEBQ15382 184 aa11.05□□□□□ -0.64
FOXA3-202ENST00000594297 ZNF575Q86XF7 245 aa11.05□□□□□ -0.64
FOXA3-202ENST00000594297 ANAPC16Q96DE5 110 aa11.05□□□□□ -0.64
FOXA3-202ENST00000594297 IGHV1OR15-1A0A075B7D0 117 aa11.04□□□□□ -0.64
FOXA3-202ENST00000594297 CRXO43186 299 aaPredicted RBP11.04□□□□□ -0.64
FOXA3-202ENST00000594297 PRR9Q5T870 116 aa11.04□□□□□ -0.64
FOXA3-202ENST00000594297 Q8NAQ8 132 aa11.04□□□□□ -0.64
FOXA3-202ENST00000594297 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
FOXA3-202ENST00000594297 OR2D3Q8NGH3 330 aa11.04□□□□□ -0.64
FOXA3-202ENST00000594297 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
FOXA3-202ENST00000594297 CTDSP1Q9GZU7 261 aa11.04□□□□□ -0.64
FOXA3-202ENST00000594297 RPP21Q9H633 154 aaKnown RBP11.04□□□□□ -0.64
FOXA3-202ENST00000594297 TRGV11A0A075B6L2 103 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 C19orf71A6NCJ1 209 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 CBY3A6NI87 242 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 A8MWL6 223 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 M0R2N4 97 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 ZNF324O75467 553 aaPredicted RBP11.03□□□□□ -0.64
FOXA3-202ENST00000594297 CRIP1P50238 77 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 Q6ZTC4 211 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 CLRN3Q8NCR9 226 aa11.03□□□□□ -0.64
FOXA3-202ENST00000594297 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms