RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 INAFM2P0DMQ5 153 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 GNG5P63218 68 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 GOLT1AQ6ZVE7 132 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 FRZBQ92765 325 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 CYTL1Q9NRR1 136 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
PNKP-202ENST00000593706 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 SLAQ13239 276 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
PNKP-202ENST00000593706 TDRG1Q3Y452 100 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 Q5VSD8 79 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 C8orf49Q96NF6 230 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
PNKP-202ENST00000593706 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
PNKP-202ENST00000593706 IGLV2-11P01706 119 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 CRYBA4P53673 196 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 ZNF415Q09FC8 603 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 FAM74A1Q5RGS3 127 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 C5orf17Q8NAS9 161 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 LY96Q9Y6Y9 160 aa10.04□□□□□ -0.8
PNKP-202ENST00000593706 BORCS7-ASMTA0A0B4J1R7 106 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 ARPC5O15511 151 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 CXorf1O96002 111 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 TCRAP04437 139 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 SRIP30626 198 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 MUC21Q5SSG8 566 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 LYPD5Q6UWN5 251 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 PCNPQ8WW12 178 aaKnown RBP10.03□□□□□ -0.8
PNKP-202ENST00000593706 ACTR3CQ9C0K3 210 aaPredicted RBP10.03□□□□□ -0.8
PNKP-202ENST00000593706 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
PNKP-202ENST00000593706 A0A087WTM6 91 aa10.02□□□□□ -0.81
PNKP-202ENST00000593706 SERTM2A0A1B0GWG4 89 aa10.02□□□□□ -0.81
PNKP-202ENST00000593706 XGP55808 180 aa10.02□□□□□ -0.81
PNKP-202ENST00000593706 TMEM167BQ9NRX6 74 aa10.02□□□□□ -0.81
PNKP-202ENST00000593706 F6UZH7 168 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 TAAR5O14804 337 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 EVI2AP22794 236 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 FHL2Q14192 279 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 ZNF345Q14585 488 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 WFDC10BQ8IUB3 73 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 OR11H4Q8NGC9 324 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 MSRB1Q9NZV6 116 aa10.01□□□□□ -0.81
PNKP-202ENST00000593706 CTXND1A0A1B0GTU2 59 aa10□□□□□ -0.81
PNKP-202ENST00000593706 A0A1W2PRE2 83 aa10□□□□□ -0.81
PNKP-202ENST00000593706 KRTAP10-1P60331 282 aa10□□□□□ -0.81
PNKP-202ENST00000593706 TMEM183BQ1AE95 376 aa10□□□□□ -0.81
PNKP-202ENST00000593706 TMEM183AQ8IXX5 376 aa10□□□□□ -0.81
PNKP-202ENST00000593706 TREM1Q9NP99 234 aa10□□□□□ -0.81
PNKP-202ENST00000593706 EPDR1Q9UM22 224 aa10□□□□□ -0.81
PNKP-202ENST00000593706 TRGV11A0A075B6L2 103 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 IGHV3-16A0A0C4DH30 117 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 K7EP13 123 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 K7EQD1 137 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 SFTA3P0C7M3 94 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 ZNF80P51504 273 aaPredicted RBP9.99□□□□□ -0.81
PNKP-202ENST00000593706 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
PNKP-202ENST00000593706 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 KCNRGQ8N5I3 272 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 CYB561D1Q8N8Q1 229 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 TMEM75Q8N9X5 138 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 RASL10AQ92737 203 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 SGK494Q96LW2 274 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 C11orf21Q9P2W6 132 aa9.99□□□□□ -0.81
PNKP-202ENST00000593706 TRAV21A0A0B4J279 112 aa9.98□□□□□ -0.81
PNKP-202ENST00000593706 ORM1P02763 201 aa9.98□□□□□ -0.81
PNKP-202ENST00000593706 GYPEP15421 78 aa9.98□□□□□ -0.81
PNKP-202ENST00000593706 GCSHP23434 173 aa9.98□□□□□ -0.81
PNKP-202ENST00000593706 SPXQ9BT56 116 aa9.98□□□□□ -0.81
PNKP-202ENST00000593706 PSG8Q9UQ74 426 aa9.98□□□□□ -0.81
PNKP-202ENST00000593706 HMSDA8MTL9 139 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 C9JCJ5 164 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 GNRH2O43555 120 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 PSCAO43653 123 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
PNKP-202ENST00000593706 TYMSP04818 313 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 CRYGDP07320 174 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 FLI1Q01543 452 aaPredicted RBP9.97□□□□□ -0.81
PNKP-202ENST00000593706 AKR1C8PQ5T2L2 129 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 C10orf126Q8N4M7 172 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 ZNF479Q96JC4 524 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 TXNDC17Q9BRA2 123 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 NAGKQ9UJ70 344 aa9.97□□□□□ -0.81
PNKP-202ENST00000593706 FAM74A7A6NL05 159 aa9.96□□□□□ -0.82
PNKP-202ENST00000593706 FHITP49789 147 aa9.96□□□□□ -0.82
PNKP-202ENST00000593706 FGF8P55075 233 aaPredicted RBP9.96□□□□□ -0.82
PNKP-202ENST00000593706 Q6ZNX1 250 aa9.96□□□□□ -0.82
PNKP-202ENST00000593706 IQCF2Q8IXL9 164 aa9.96□□□□□ -0.82
PNKP-202ENST00000593706 LINC00479Q96M42 142 aa9.96□□□□□ -0.82
PNKP-202ENST00000593706 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
PNKP-202ENST00000593706 FBLL1A6NHQ2 334 aaKnown RBP9.95□□□□□ -0.82
PNKP-202ENST00000593706 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms