RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 OR4C46A6NHA9 309 aa14.85□□□□□ -0.03
CLIP3-206ENST00000593074 DCANP1Q8TF63 244 aa14.85□□□□□ -0.03
CLIP3-206ENST00000593074 ZNF747Q9BV97 191 aa14.85□□□□□ -0.03
CLIP3-206ENST00000593074 TRAV21A0A0B4J279 112 aa14.85□□□□□ -0.03
CLIP3-206ENST00000593074 RNF152Q8N8N0 203 aa14.85□□□□□ -0.03
CLIP3-206ENST00000593074 DUX5Q96PT3 197 aa14.85□□□□□ -0.03
CLIP3-206ENST00000593074 A0A1B0GV90 55 aa14.84□□□□□ -0.03
CLIP3-206ENST00000593074 F6UB75 175 aa14.84□□□□□ -0.03
CLIP3-206ENST00000593074 TCF21O43680 179 aa14.84□□□□□ -0.03
CLIP3-206ENST00000593074 LGALS1P09382 135 aaKnown RBP14.84□□□□□ -0.03
CLIP3-206ENST00000593074 CACNG7P62955 275 aa14.83□□□□□ -0.03
CLIP3-206ENST00000593074 IGLL1P15814 213 aa14.83□□□□□ -0.04
CLIP3-206ENST00000593074 ID1P41134 155 aa14.83□□□□□ -0.04
CLIP3-206ENST00000593074 Q8N2B8 174 aa14.83□□□□□ -0.04
CLIP3-206ENST00000593074 MXRA5Q9NR99 2828 aa14.82□□□□□ -0.04
CLIP3-206ENST00000593074 LINC01546A6NGU7 62 aa14.82□□□□□ -0.04
CLIP3-206ENST00000593074 J3KRW8 73 aa14.82□□□□□ -0.04
CLIP3-206ENST00000593074 SRD5A1P18405 259 aa14.82□□□□□ -0.04
CLIP3-206ENST00000593074 LINC01545Q5VT33 79 aa14.82□□□□□ -0.04
CLIP3-206ENST00000593074 UBE2E2Q96LR5 201 aa14.82□□□□□ -0.04
CLIP3-206ENST00000593074 MAP1LC3AQ9H492 121 aa14.82□□□□□ -0.04
CLIP3-206ENST00000593074 H3BVH4 76 aa14.81□□□□□ -0.04
CLIP3-206ENST00000593074 SELENOKQ9Y6D0 94 aa14.81□□□□□ -0.04
CLIP3-206ENST00000593074 LGALS9O00182 355 aa14.81□□□□□ -0.04
CLIP3-206ENST00000593074 GAS8-AS1O95177 125 aa14.81□□□□□ -0.04
CLIP3-206ENST00000593074 EVI2AP22794 236 aa14.81□□□□□ -0.04
CLIP3-206ENST00000593074 TMEM86BQ8N661 226 aa14.81□□□□□ -0.04
CLIP3-206ENST00000593074 TIMM8BQ9Y5J9 83 aaPredicted RBP14.81□□□□□ -0.04
CLIP3-206ENST00000593074 TEX15Q9BXT5 2789 aa14.81□□□□□ -0.04
CLIP3-206ENST00000593074 TNFRSF6BO95407 300 aa14.8□□□□□ -0.04
CLIP3-206ENST00000593074 SPANXN1Q5VSR9 72 aa14.8□□□□□ -0.04
CLIP3-206ENST00000593074 SMIM15Q7Z3B0 74 aa14.8□□□□□ -0.04
CLIP3-206ENST00000593074 HBDP02042 147 aa14.8□□□□□ -0.04
CLIP3-206ENST00000593074 FOXC2Q99958 501 aa14.8□□□□□ -0.04
CLIP3-206ENST00000593074 IGHV4OR15-8A0A075B7B6 117 aa14.79□□□□□ -0.04
CLIP3-206ENST00000593074 A0A087WW49 117 aa14.79□□□□□ -0.04
CLIP3-206ENST00000593074 Q6ZN92 141 aa14.79□□□□□ -0.04
CLIP3-206ENST00000593074 MS4A6AQ9H2W1 248 aa14.79□□□□□ -0.04
CLIP3-206ENST00000593074 ST20Q9HBF5 79 aa14.79□□□□□ -0.04
CLIP3-206ENST00000593074 KLLNB2CW77 178 aa14.78□□□□□ -0.04
CLIP3-206ENST00000593074 MED14OSP0DP75 135 aa14.78□□□□□ -0.04
CLIP3-206ENST00000593074 RNASE4P34096 147 aaKnown RBP14.78□□□□□ -0.04
CLIP3-206ENST00000593074 NXT2Q9NPJ8 142 aaKnown RBP14.78□□□□□ -0.04
CLIP3-206ENST00000593074 SYNJ2BPP57105 145 aa14.78□□□□□ -0.04
CLIP3-206ENST00000593074 ASIPP42127 132 aa14.77□□□□□ -0.04
CLIP3-206ENST00000593074 KIR3DS1Q14943 382 aa14.77□□□□□ -0.04
CLIP3-206ENST00000593074 ANXA2RQ3ZCQ2 193 aa14.77□□□□□ -0.04
CLIP3-206ENST00000593074 SCRT2Q9NQ03 307 aa14.77□□□□□ -0.04
CLIP3-206ENST00000593074 H0Y8G0 127 aa14.77□□□□□ -0.05
CLIP3-206ENST00000593074 HOXD3P31249 432 aaPredicted RBP14.77□□□□□ -0.05
CLIP3-206ENST00000593074 HNRNPA3P51991 378 aaKnown RBP14.77□□□□□ -0.05
CLIP3-206ENST00000593074 MCRIP2Q9BUT9 160 aaKnown RBP14.77□□□□□ -0.05
CLIP3-206ENST00000593074 ITPR3Q14573 2671 aa14.76□□□□□ -0.05
CLIP3-206ENST00000593074 GATA1P15976 413 aaPredicted RBP14.76□□□□□ -0.05
CLIP3-206ENST00000593074 NUTF2P61970 127 aaKnown RBP14.76□□□□□ -0.05
CLIP3-206ENST00000593074 WFDC3Q8IUB2 231 aa14.76□□□□□ -0.05
CLIP3-206ENST00000593074 DEFB125Q8N687 156 aa14.76□□□□□ -0.05
CLIP3-206ENST00000593074 hDV102S1A0JD36 115 aa14.75□□□□□ -0.05
CLIP3-206ENST00000593074 TSPOP30536 169 aa14.75□□□□□ -0.05
CLIP3-206ENST00000593074 NRACQ8N912 160 aa14.75□□□□□ -0.05
CLIP3-206ENST00000593074 OR2K2Q8NGT1 345 aa14.75□□□□□ -0.05
CLIP3-206ENST00000593074 PRSS47A8MTI9 375 aa14.75□□□□□ -0.05
CLIP3-206ENST00000593074 K7EQG2 157 aa14.75□□□□□ -0.05
CLIP3-206ENST00000593074 ODF3Q96PU9 254 aa14.75□□□□□ -0.05
CLIP3-206ENST00000593074 IGLV2-18A0A075B6J9 118 aa14.74□□□□□ -0.05
CLIP3-206ENST00000593074 CD5LO43866 347 aa14.74□□□□□ -0.05
CLIP3-206ENST00000593074 S100A4P26447 101 aaKnown RBP14.74□□□□□ -0.05
CLIP3-206ENST00000593074 FXYD7P58549 80 aa14.74□□□□□ -0.05
CLIP3-206ENST00000593074 HSBP1L1C9JCN9 74 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 ZNF688P0C7X2 276 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 SNRPD3P62318 126 aaKnown RBP14.73□□□□□ -0.05
CLIP3-206ENST00000593074 MRAP2Q96G30 205 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 YAE1D1Q9NRH1 226 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 MRPS16Q9Y3D3 137 aaKnown RBP14.73□□□□□ -0.05
CLIP3-206ENST00000593074 RNASE3P12724 160 aaKnown RBP14.73□□□□□ -0.05
CLIP3-206ENST00000593074 KRTAP1-1Q07627 177 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 PSMG4Q5JS54 123 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 Q8N8P6 123 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 PMCHL2Q9BQD1 86 aa14.73□□□□□ -0.05
CLIP3-206ENST00000593074 HELZ2Q9BYK8 2649 aaKnown RBP14.73□□□□□ -0.05
CLIP3-206ENST00000593074 TRAV26-2A0A0B4J265 109 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 DNAJC9-AS1A6NH13 148 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 TFPI2P48307 235 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 LGALS9BQ3B8N2 356 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 LGALS9CQ6DKI2 356 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 IFI27L1Q96BM0 104 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 ZMAT5Q9UDW3 170 aaKnown RBP14.72□□□□□ -0.05
CLIP3-206ENST00000593074 PHLDA3Q9Y5J5 127 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 CCDC168Q8NDH2 2452 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 ZNF469Q96JG9 3925 aaPredicted RBP14.72□□□□□ -0.05
CLIP3-206ENST00000593074 A0A0J9YX75 114 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 M0R381 172 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 FCER1GP30273 86 aa14.72□□□□□ -0.05
CLIP3-206ENST00000593074 NXPH4O95158 308 aa14.71□□□□□ -0.05
CLIP3-206ENST00000593074 NBPF19A0A087WUL8 3843 aa14.71□□□□□ -0.06
CLIP3-206ENST00000593074 GNRH2O43555 120 aa14.7□□□□□ -0.06
CLIP3-206ENST00000593074 Q6ZSV7 163 aa14.7□□□□□ -0.06
CLIP3-206ENST00000593074 LEPP41159 167 aa14.7□□□□□ -0.06
CLIP3-206ENST00000593074 C18orf65Q6ZTR6 163 aa14.7□□□□□ -0.06
CLIP3-206ENST00000593074 LINC00469Q8N7U9 141 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms