RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
DDX39A-220ENST00000593008 GOLT1BQ9Y3E0 138 aa6.93□□□□□ -1.3
DDX39A-220ENST00000593008 LENEPQ9Y5L5 61 aa6.93□□□□□ -1.3
DDX39A-220ENST00000593008 IGHV1OR15-1A0A075B7D0 117 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 TYMSP04818 313 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 S100A9P06702 114 aaKnown RBP6.92□□□□□ -1.3
DDX39A-220ENST00000593008 PFN1P07737 140 aaKnown RBP6.92□□□□□ -1.3
DDX39A-220ENST00000593008 RPL23P62829 140 aaKnown RBP6.92□□□□□ -1.3
DDX39A-220ENST00000593008 ADIRFQ15847 76 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 SOHLH1Q5JUK2 328 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 SAPCD1Q5SSQ6 148 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 COX8CQ7Z4L0 72 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 TMEM256Q8N2U0 113 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 NIPSNAP3BQ9BS92 247 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 MDFICQ9P1T7 246 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
DDX39A-220ENST00000593008 TRAV21A0A0B4J279 112 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 TMEM218A2RU14 115 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 TMEM189A5PLL7 270 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 CXorf65A6NEN9 183 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 CBY3A6NI87 242 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 H7BYZ3 331 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 FAM162BQ5T6X4 162 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 EIF4E3Q8N5X7 224 aaKnown RBP6.91□□□□□ -1.3
DDX39A-220ENST00000593008 C11orf72Q8NBR9 251 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 TIMM8BQ9Y5J9 83 aaPredicted RBP6.91□□□□□ -1.3
DDX39A-220ENST00000593008 RYR3Q15413 4870 aa6.91□□□□□ -1.3
DDX39A-220ENST00000593008 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 MUC21A0A0G2JKD1 596 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 MUC21A0A140T8X8 626 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 KRBOX1C9JBD0 128 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 ORM1P02763 201 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 UQCC3Q6UW78 93 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.3
DDX39A-220ENST00000593008 ISOC2Q96AB3 205 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 SDF2L1Q9HCN8 221 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 NAT8Q9UHE5 227 aa6.9□□□□□ -1.3
DDX39A-220ENST00000593008 TEX48A0A1B0GUV7 120 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 B4DEV8 164 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 F8W036 122 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 H3BVH4 76 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 NDUFS6O75380 124 aaKnown RBP6.89□□□□□ -1.31
DDX39A-220ENST00000593008 MIFP14174 115 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 TMEM241Q24JQ0 296 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 RRN3P1Q2M238 152 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 PYGO2Q9BRQ0 406 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
DDX39A-220ENST00000593008 MRPL16Q9NX20 251 aaKnown RBP6.89□□□□□ -1.31
DDX39A-220ENST00000593008 FABP5P3A8MUU1 101 aa6.88□□□□□ -1.31
DDX39A-220ENST00000593008 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
DDX39A-220ENST00000593008 TCL1AP56279 114 aa6.88□□□□□ -1.31
DDX39A-220ENST00000593008 NANOS2P60321 138 aaKnown RBP6.88□□□□□ -1.31
DDX39A-220ENST00000593008 FAM74A3Q4VXF1 159 aa6.88□□□□□ -1.31
DDX39A-220ENST00000593008 FAM159AQ6UWV7 190 aa6.88□□□□□ -1.31
DDX39A-220ENST00000593008 OR2D3Q8NGH3 330 aa6.88□□□□□ -1.31
DDX39A-220ENST00000593008 NEU1Q99519 415 aa6.88□□□□□ -1.31
DDX39A-220ENST00000593008 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
DDX39A-220ENST00000593008 LCE6AA0A183 80 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 P01737 135 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 ERVFC1-1P60608 527 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 SSTP61278 116 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 TDRG1Q3Y452 100 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 IBA57Q5T440 356 aaKnown RBP6.87□□□□□ -1.31
DDX39A-220ENST00000593008 FAM222AQ5U5X8 452 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 ZNF493Q6ZR52 646 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 Q6ZTI0 123 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 TMEM263Q8WUH6 116 aaKnown RBP6.87□□□□□ -1.31
DDX39A-220ENST00000593008 LINC00467Q9BRT7 94 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 RPP21Q9H633 154 aaKnown RBP6.87□□□□□ -1.31
DDX39A-220ENST00000593008 BIN3Q9NQY0 253 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 V9GYV3 84 aa6.87□□□□□ -1.31
DDX39A-220ENST00000593008 C10orf91Q5T1B1 145 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 OR10AG1Q8NH19 301 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 C11orf45Q8TAV5 145 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 GTSF1Q8WW33 167 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 SMIM12Q96EX1 92 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 SFRP2Q96HF1 295 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 C9orf85Q96MD7 179 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 TPPP3Q9BW30 176 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 SEC11CQ9BY50 192 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 C11orf68Q9H3H3 251 aaKnown RBP6.86□□□□□ -1.31
DDX39A-220ENST00000593008 CARHSP1Q9Y2V2 147 aaKnown RBP6.86□□□□□ -1.31
DDX39A-220ENST00000593008 LY96Q9Y6Y9 160 aa6.86□□□□□ -1.31
DDX39A-220ENST00000593008 LYSTQ99698 3801 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 GAGE12BA1L429 117 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 GATCO43716 136 aaKnown RBP6.85□□□□□ -1.31
DDX39A-220ENST00000593008 GAGE7O76087 117 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 ARMS2P0C7Q2 107 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 GAGE12FP0CL80 117 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 GAGE12GP0CL81 117 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 GAGE12IP0CL82 117 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 ASIPP42127 132 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 ZNF415Q09FC8 603 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms