RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 KRTAP1-5Q9BYS1 174 aa9.58□□□□□ -0.88
APOC1-208ENST00000592535 HERC2O95714 4834 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 SERTM2A0A1B0GWG4 89 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 KANTRA0A1W2PQU2 76 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 GGTLC3B5MD39 225 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 GNRH2O43555 120 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 CRYBA4P53673 196 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 SUMO1P63165 101 aaKnown RBP9.57□□□□□ -0.88
APOC1-208ENST00000592535 TNP2Q05952 138 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 ZNF726P1Q15940 193 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 SLC51BQ86UW2 128 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 STOML3Q8TAV4 291 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 C8orf49Q96NF6 230 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 TMEM167BQ9NRX6 74 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 ICOSQ9Y6W8 199 aa9.57□□□□□ -0.88
APOC1-208ENST00000592535 DYNC1H1Q14204 4646 aaKnown RBP9.57□□□□□ -0.88
APOC1-208ENST00000592535 PKD1P98161 4303 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 IGHV3-16A0A0C4DH30 117 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 TYMSP04818 313 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 SFTA3P0C7M3 94 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 IQCF2Q8IXL9 164 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 RASL10AQ92737 203 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 ZNF479Q96JC4 524 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 NDFIP1Q9BT67 221 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 PSG8Q9UQ74 426 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
APOC1-208ENST00000592535 KIAA1109Q2LD37 5005 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 TRGV4A0A0C4DH28 118 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 K7EQM0 130 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 ZNF80P51504 273 aaPredicted RBP9.55□□□□□ -0.88
APOC1-208ENST00000592535 IFITM2Q01629 132 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 SLAQ13239 276 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 TTC32Q5I0X7 151 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 ZNF471Q9BX82 626 aaPredicted RBP9.55□□□□□ -0.88
APOC1-208ENST00000592535 SDF2L1Q9HCN8 221 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 EPDR1Q9UM22 224 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
APOC1-208ENST00000592535 PKHD1P08F94 4074 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 M0R2P5 195 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 FLI1Q01543 452 aaPredicted RBP9.54□□□□□ -0.88
APOC1-208ENST00000592535 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 ZNF575Q86XF7 245 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 CYB561D1Q8N8Q1 229 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 KCNS1Q96KK3 526 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 C11orf21Q9P2W6 132 aa9.54□□□□□ -0.88
APOC1-208ENST00000592535 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
APOC1-208ENST00000592535 GCGP01275 180 aa9.53□□□□□ -0.88
APOC1-208ENST00000592535 FGF8P55075 233 aaPredicted RBP9.53□□□□□ -0.88
APOC1-208ENST00000592535 EIF5AP63241 154 aaKnown RBP9.53□□□□□ -0.88
APOC1-208ENST00000592535 AKR1C8PQ5T2L2 129 aa9.53□□□□□ -0.88
APOC1-208ENST00000592535 TMEM75Q8N9X5 138 aa9.53□□□□□ -0.88
APOC1-208ENST00000592535 TRAV4A0A0B4J268 109 aa9.52□□□□□ -0.89
APOC1-208ENST00000592535 A0A1W2PPQ1 181 aa9.52□□□□□ -0.89
APOC1-208ENST00000592535 SEC11BP0C7V7 166 aa9.52□□□□□ -0.89
APOC1-208ENST00000592535 TPT1P13693 172 aaKnown RBP9.52□□□□□ -0.89
APOC1-208ENST00000592535 UBE2G2P60604 165 aa9.52□□□□□ -0.89
APOC1-208ENST00000592535 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
APOC1-208ENST00000592535 TEX261Q6UWH6 196 aa9.52□□□□□ -0.89
APOC1-208ENST00000592535 OR4C5Q8NGB2 326 aa9.52□□□□□ -0.89
APOC1-208ENST00000592535 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 K7EQD1 137 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 SIVA1O15304 175 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 NXPH4O95158 308 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
APOC1-208ENST00000592535 MED14OSP0DP75 135 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 GYPEP15421 78 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 LYPD5Q6UWN5 251 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
APOC1-208ENST00000592535 FBLL1A6NHQ2 334 aaKnown RBP9.5□□□□□ -0.89
APOC1-208ENST00000592535 FAM74A7A6NL05 159 aa9.5□□□□□ -0.89
APOC1-208ENST00000592535 C9JCJ5 164 aa9.5□□□□□ -0.89
APOC1-208ENST00000592535 IFNA7P01567 189 aa9.5□□□□□ -0.89
APOC1-208ENST00000592535 SRIP30626 198 aa9.5□□□□□ -0.89
APOC1-208ENST00000592535 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
APOC1-208ENST00000592535 PCNPQ8WW12 178 aaKnown RBP9.5□□□□□ -0.89
APOC1-208ENST00000592535 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
APOC1-208ENST00000592535 PEX7O00628 323 aa9.49□□□□□ -0.89
APOC1-208ENST00000592535 ORM1P02763 201 aa9.49□□□□□ -0.89
APOC1-208ENST00000592535 SAPCD1Q5SSQ6 148 aa9.49□□□□□ -0.89
APOC1-208ENST00000592535 C9orf85Q96MD7 179 aa9.49□□□□□ -0.89
APOC1-208ENST00000592535 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
APOC1-208ENST00000592535 ARL2-SNX15V9GYD0 113 aa9.49□□□□□ -0.89
APOC1-208ENST00000592535 LOC100131303A0A0U1RQF7 123 aa9.48□□□□□ -0.89
APOC1-208ENST00000592535 GATA1P15976 413 aaPredicted RBP9.48□□□□□ -0.89
APOC1-208ENST00000592535 PPT1P50897 306 aa9.48□□□□□ -0.89
APOC1-208ENST00000592535 LINC00315P59091 139 aa9.48□□□□□ -0.89
APOC1-208ENST00000592535 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
APOC1-208ENST00000592535 EIF5AL1Q6IS14 154 aaKnown RBP9.48□□□□□ -0.89
APOC1-208ENST00000592535 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
APOC1-208ENST00000592535 Q86TA4 180 aa9.48□□□□□ -0.89
APOC1-208ENST00000592535 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
APOC1-208ENST00000592535 RNASE3P12724 160 aaKnown RBP9.47□□□□□ -0.89
APOC1-208ENST00000592535 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
APOC1-208ENST00000592535 FHITP49789 147 aa9.47□□□□□ -0.89
APOC1-208ENST00000592535 NKX6-2Q9C056 277 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms