RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 RIF1Q5UIP0 2472 aaKnown RBP9.54□□□□□ -0.88
SMARCA4-217ENST00000591595 OVOL1O14753 267 aa9.54□□□□□ -0.88
SMARCA4-217ENST00000591595 PATE2Q6UY27 113 aa9.54□□□□□ -0.88
SMARCA4-217ENST00000591595 CD40P25942 277 aa9.54□□□□□ -0.88
SMARCA4-217ENST00000591595 LINC00527Q9UJ94 153 aa9.54□□□□□ -0.88
SMARCA4-217ENST00000591595 LGALS9O00182 355 aa9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 OXTP01178 125 aa9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 VMA21Q3ZAQ7 101 aa9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 MRPL36Q9P0J6 103 aaKnown RBP9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 V9GYY9 64 aa9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 OVOL3O00110 214 aa9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 ZNF833PQ6ZTB9 187 aa9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 C22orf34Q6ZV56 151 aa9.53□□□□□ -0.88
SMARCA4-217ENST00000591595 RPL13AP40429 203 aaKnown RBP9.52□□□□□ -0.88
SMARCA4-217ENST00000591595 FXYD5Q96DB9 178 aa9.52□□□□□ -0.88
SMARCA4-217ENST00000591595 ACACAQ13085 2346 aa9.52□□□□□ -0.88
SMARCA4-217ENST00000591595 LGALS1P09382 135 aaKnown RBP9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 TMEM30BQ3MIR4 351 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 NDUFA11Q86Y39 141 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 TPSG1Q9NRR2 321 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 MRPL35Q9NZE8 188 aaKnown RBP9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 MRPS12O15235 138 aaKnown RBP9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 NDUFB3O43676 98 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 CRYGAP11844 174 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 PRB3Q04118 309 aaPredicted RBP9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 ZNF415Q09FC8 603 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 EBI3Q14213 229 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 TMEM200BQ69YZ2 307 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 FAM215AQ9Y5M1 114 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 U3KQK5 164 aa9.52□□□□□ -0.89
SMARCA4-217ENST00000591595 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 COX7CP15954 63 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 MYCNOSP40205 109 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 TMEM167AQ8TBQ9 72 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 MGAQ8IWI9 3026 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 H3BMM0 161 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 LEPP41159 167 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 IGFL2Q6UWQ7 119 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 SRSF12Q8WXF0 261 aaKnown RBP9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 UBE2WQ96B02 151 aa9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
SMARCA4-217ENST00000591595 FMC1Q96HJ9 113 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 DSCR8Q96T75 97 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 ZNF318Q5VUA4 2279 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 TRACP01848 142 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 CNTFRP26992 372 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 LYZP61626 148 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 RNF125Q96EQ8 232 aa9.5□□□□□ -0.89
SMARCA4-217ENST00000591595 IGKV1D-37A0A075B6S9 117 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 FAM104BQ5XKR9 115 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 DTX2Q86UW9 622 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 SPANXDQ9BXN6 97 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 PIEZO2Q9H5I5 2752 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 C17orf100A8MU93 164 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 C3orf36Q3SXR2 165 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 LINC00574Q9H8X3 128 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 DSCAML1Q8TD84 2053 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 NDUFA3O95167 84 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 DLX1P56177 255 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 TMEM258P61165 79 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 LYPD2Q6UXB3 125 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 Q9H3A6 140 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 DYNLRB1Q9NP97 96 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
SMARCA4-217ENST00000591595 DCHS1Q96JQ0 3298 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 SMKR1H3BMG3 65 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 CKS2P33552 79 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 RPL27AP46776 148 aaKnown RBP9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 SCGB1D4Q6XE38 83 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 SPTA1P02549 2419 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 CGB1A6NKQ9 187 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 ATP5G1P05496 136 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 PLGLAQ15195 96 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 MRPL51Q4U2R6 128 aaKnown RBP9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 OTOGLQ3ZCN5 2332 aa9.48□□□□□ -0.89
SMARCA4-217ENST00000591595 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 MYOZ3Q8TDC0 251 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 NXT2Q9NPJ8 142 aaKnown RBP9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 PTPRZ1P23471 2315 aaPredicted RBP9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 INS-IGF2F8WCM5 200 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 RUSC1-AS1Q66K80 236 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 ZGRF1Q86YA3 2104 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 TCRAP04437 139 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 MALRD1Q5VYJ5 2156 aa9.47□□□□□ -0.89
SMARCA4-217ENST00000591595 TMEM86BQ8N661 226 aa9.46□□□□□ -0.89
SMARCA4-217ENST00000591595 THAP8Q8NA92 274 aa9.46□□□□□ -0.89
SMARCA4-217ENST00000591595 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.89
SMARCA4-217ENST00000591595 BSPH1Q075Z2 132 aa9.46□□□□□ -0.9
SMARCA4-217ENST00000591595 ADGRG4Q8IZF6 3080 aa9.46□□□□□ -0.9
SMARCA4-217ENST00000591595 PLNP26678 52 aa9.46□□□□□ -0.9
SMARCA4-217ENST00000591595 HLA-DMBP28068 263 aa9.46□□□□□ -0.9
SMARCA4-217ENST00000591595 EXOC3-AS1Q8N2X6 119 aa9.46□□□□□ -0.9
SMARCA4-217ENST00000591595 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.9
SMARCA4-217ENST00000591595 IGLV2-23P01705 113 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms