RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PRR20EP86478 221 aa10.52□□□□□ -0.72
SMARCA4-216ENST00000591545 PRR20CP86479 221 aa10.52□□□□□ -0.72
SMARCA4-216ENST00000591545 PRR20DP86480 221 aa10.52□□□□□ -0.72
SMARCA4-216ENST00000591545 PRR20BP86481 221 aa10.52□□□□□ -0.72
SMARCA4-216ENST00000591545 PRR20AP86496 221 aa10.52□□□□□ -0.72
SMARCA4-216ENST00000591545 PRSS57Q6UWY2 283 aa10.52□□□□□ -0.72
SMARCA4-216ENST00000591545 FXYD5Q96DB9 178 aa10.52□□□□□ -0.72
SMARCA4-216ENST00000591545 KIAA1549LQ6ZVL6 1849 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 CEND1Q8N111 149 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 WT1-ASQ06250 92 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 KLF5Q13887 457 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 Q8NA96 180 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 Q8NFD4 153 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 DEFB104AQ8WTQ1 72 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 UBL5Q9BZL1 73 aa10.52□□□□□ -0.73
SMARCA4-216ENST00000591545 ZNF625Q96I27 306 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 CDKN1BP46527 198 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 CENPVL3A0A0U1RRI6 287 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 IGLC1P0CG04 106 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 TMEM243Q9BU79 118 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 IGHV7-4-1A0A0J9YVY3 117 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 LTAP01374 205 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 MRAPQ8TCY5 172 aa10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-216ENST00000591545 IGHV4-38-2P0DP08 117 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 FGF6P10767 208 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 HLA-DMBP28068 263 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 VWC2Q2TAL6 325 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 ANXA2RQ3ZCQ2 193 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 MRPL35Q9NZE8 188 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 TRAV13-2A0A0B4J235 113 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 FOXE3Q13461 319 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 NPYP01303 97 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 RBMY1FQ15415 496 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 ETDBQ3ZM63 59 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 COA6Q5JTJ3 125 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 LENEPQ9Y5L5 61 aa10.5□□□□□ -0.73
SMARCA4-216ENST00000591545 HERVK_113P63121 156 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 GAGE12JA6NER3 117 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 GAGE4Q13068 117 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 GAGE5Q13069 117 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 DIAPH2-AS1Q14236 149 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 TPSG1Q9NRR2 321 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 ZNF134P52741 427 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 ZNF493Q6ZR52 646 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 SEM1Q6ZVN7 128 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 RMI2Q96E14 147 aa10.49□□□□□ -0.73
SMARCA4-216ENST00000591545 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 RBAKDNA6NC62 111 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 RHOHQ15669 191 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 J3QQQ9 107 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 ZNF561-AS1K7EIQ3 104 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 GAGE7O76087 117 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 GAGE12FP0CL80 117 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 GAGE12GP0CL81 117 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 GAGE12IP0CL82 117 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 AZU1P20160 251 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 CFHR3Q02985 330 aa10.48□□□□□ -0.73
SMARCA4-216ENST00000591545 C11orf53Q8IXP5 236 aa10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 LRRC75A-AS1Q8N1F1 130 aa10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 LHBP01229 141 aa10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 IFITM1P13164 125 aa10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
SMARCA4-216ENST00000591545 KLK9Q9UKQ9 250 aa10.46□□□□□ -0.73
SMARCA4-216ENST00000591545 KIR2DL5BA0A0G2JN68 375 aa10.46□□□□□ -0.74
SMARCA4-216ENST00000591545 KIR2DL5BA0A0G2JPC4 375 aa10.46□□□□□ -0.74
SMARCA4-216ENST00000591545 KIR2DL5AQ8N109 375 aa10.46□□□□□ -0.74
SMARCA4-216ENST00000591545 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.74
SMARCA4-216ENST00000591545 ZNF747Q9BV97 191 aa10.46□□□□□ -0.74
SMARCA4-216ENST00000591545 IGHG4P01861 327 aa10.45□□□□□ -0.74
SMARCA4-216ENST00000591545 ZNF491Q8N8L2 437 aa10.45□□□□□ -0.74
SMARCA4-216ENST00000591545 ZNRF2Q8NHG8 242 aa10.45□□□□□ -0.74
SMARCA4-216ENST00000591545 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
SMARCA4-216ENST00000591545 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
SMARCA4-216ENST00000591545 ANKHD1Q8IWZ3 2542 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-216ENST00000591545 GP9P14770 177 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 SHANK1Q9Y566 2161 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 IGLC7A0M8Q6 106 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 K7EN84 100 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 LOXL1Q08397 574 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 NKAPP1Q8N9T2 125 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 CLPSL1A2RUU4 121 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 C12orf74Q32Q52 190 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 MORN5Q5VZ52 161 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 WIPF3A6NGB9 483 aa10.44□□□□□ -0.74
SMARCA4-216ENST00000591545 PFN2P35080 140 aa10.43□□□□□ -0.74
SMARCA4-216ENST00000591545 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
SMARCA4-216ENST00000591545 CSPG4Q6UVK1 2322 aa10.43□□□□□ -0.74
SMARCA4-216ENST00000591545 ZNF843Q8N446 348 aa10.43□□□□□ -0.74
SMARCA4-216ENST00000591545 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-216ENST00000591545 DEFB136Q30KP8 78 aa10.43□□□□□ -0.74
SMARCA4-216ENST00000591545 TMEM126AQ9H061 195 aa10.42□□□□□ -0.74
SMARCA4-216ENST00000591545 CRLF1O75462 422 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms