RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 UBE2G2P60604 165 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 ESRGQ1W209 222 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 FAM74A1Q5RGS3 127 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 C9orf47Q6ZRZ4 202 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 TCTE3Q8IZS6 198 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 LYPD1Q8N2G4 141 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 FAM19A4Q96LR4 140 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 SGK494Q96LW2 274 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 LINC00467Q9BRT7 94 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 GAGE12BA1L429 117 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 MAP1LC3B2A6NCE7 125 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 SNURFLB1AK76 121 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 ZNF324O75467 553 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-207ENST00000591519 GAGE7O76087 117 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 GPX1P07203 203 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 GAGE12FP0CL80 117 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 GAGE12GP0CL81 117 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 GAGE12IP0CL82 117 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 ZNF138P52744 262 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 TTC32Q5I0X7 151 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 PRR9Q5T870 116 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 Q6ZQT7 251 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 FAM213BQ8TBF2 198 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 TMED6Q8WW62 240 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 MAP1LC3BQ9GZQ8 125 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 TMEM167BQ9NRX6 74 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 ZNF492Q9P255 531 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 ABCA13Q86UQ4 5058 aa7.19□□□□□ -1.26
VPS4B-207ENST00000591519 TRAV8-1A0A0A6YYK1 113 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 A0A0J9YY99 117 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 C7orf71A4D174 169 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 KLLNB2CW77 178 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 C1QBP02746 253 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 NMBP08949 121 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 SUMO1P63165 101 aaKnown RBP7.18□□□□□ -1.26
VPS4B-207ENST00000591519 ANXA2RQ3ZCQ2 193 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 LGALSLQ3ZCW2 172 aaPredicted RBP7.18□□□□□ -1.26
VPS4B-207ENST00000591519 C11orf72Q8NBR9 251 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 VSIG2Q96IQ7 327 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 KRTAP1-5Q9BYS1 174 aa7.18□□□□□ -1.26
VPS4B-207ENST00000591519 MRPS16Q9Y3D3 137 aaKnown RBP7.18□□□□□ -1.26
VPS4B-207ENST00000591519 GGTLC3B5MD39 225 aa7.17□□□□□ -1.26
VPS4B-207ENST00000591519 TPT1P13693 172 aaKnown RBP7.17□□□□□ -1.26
VPS4B-207ENST00000591519 CRISP2P16562 243 aa7.17□□□□□ -1.26
VPS4B-207ENST00000591519 Q6ZTI0 123 aa7.17□□□□□ -1.26
VPS4B-207ENST00000591519 ZFAND2AQ8N6M9 145 aa7.17□□□□□ -1.26
VPS4B-207ENST00000591519 ZNF680Q8NEM1 530 aa7.17□□□□□ -1.26
VPS4B-207ENST00000591519 A0A096LPF7 62 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 F6UZH7 168 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 RGS13O14921 159 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 IFNA7P01567 189 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 SEC11BP0C7V7 166 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 EIF5AP63241 154 aaKnown RBP7.16□□□□□ -1.26
VPS4B-207ENST00000591519 SRSF3P84103 164 aaKnown RBP7.16□□□□□ -1.26
VPS4B-207ENST00000591519 MUC21Q5SSG8 566 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 SPATA12Q7Z6I5 190 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 C5orf17Q8NAS9 161 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 SUN5Q8TC36 379 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 SFT2D1Q8WV19 159 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 GSN-AS1Q9NRJ2 163 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 HSPG2P98160 4391 aa7.16□□□□□ -1.26
VPS4B-207ENST00000591519 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 TRAV34A0A0B4J273 112 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 SPINK4O60575 86 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 TCRAP04437 139 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 NKX2-5P52952 324 aaPredicted RBP7.15□□□□□ -1.26
VPS4B-207ENST00000591519 KRTAP10-2P60368 255 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 ZFP69Q49AA0 526 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 IBA57Q5T440 356 aaKnown RBP7.15□□□□□ -1.26
VPS4B-207ENST00000591519 CST9LP1Q5W188 147 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 PRNTQ86SH4 94 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 Q8N1X5 172 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 EIF4E3Q8N5X7 224 aaKnown RBP7.15□□□□□ -1.26
VPS4B-207ENST00000591519 STOML3Q8TAV4 291 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 C8orf49Q96NF6 230 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 TREM1Q9NP99 234 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 NAGKQ9UJ70 344 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 TP53TG3Q9ULZ0 132 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 EPDR1Q9UM22 224 aa7.15□□□□□ -1.26
VPS4B-207ENST00000591519 TRBV7-9A0A0J9YWB2 115 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 FAM74A7A6NL05 159 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 UMAD1C9J7I0 102 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 K7EQM0 130 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 TCL1AP56279 114 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 C9orf62Q8N4C0 152 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 MAPKAPK5-AS1Q8N8E1 139 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 TVP23CQ96ET8 276 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 LINC00479Q96M42 142 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 KLF12Q9Y4X4 402 aa7.14□□□□□ -1.27
VPS4B-207ENST00000591519 IGHV1OR15-1A0A075B7D0 117 aa7.13□□□□□ -1.27
VPS4B-207ENST00000591519 TRGV1A0A0A0MS02 117 aa7.13□□□□□ -1.27
VPS4B-207ENST00000591519 A0A1W2PRE2 83 aa7.13□□□□□ -1.27
VPS4B-207ENST00000591519 PAGE4O60829 102 aa7.13□□□□□ -1.27
VPS4B-207ENST00000591519 SLAQ13239 276 aa7.13□□□□□ -1.27
VPS4B-207ENST00000591519 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
VPS4B-207ENST00000591519 CYB561D1Q8N8Q1 229 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms