RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 MYOZ3Q8TDC0 251 aa8.33□□□□□ -1.08
VPS4B-206ENST00000591475 NRGNQ92686 78 aa8.33□□□□□ -1.08
VPS4B-206ENST00000591475 TTTY13Q9BZ97 58 aa8.33□□□□□ -1.08
VPS4B-206ENST00000591475 CLEC2AQ6UVW9 174 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 CEND1Q8N111 149 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 TM2D2Q9BX73 214 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 BPESC1Q9GZL8 116 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 AGPAT4-IT1Q9H0P7 198 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 TMEM160Q9NX00 188 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 C11orf21Q9P2W6 132 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 CLEC3BP05452 202 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 ECSCRQ19T08 205 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 KLK9Q2XQG4 91 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 NRACQ8N912 160 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 MRPL53Q96EL3 112 aaKnown RBP8.32□□□□□ -1.08
VPS4B-206ENST00000591475 HIF1ANQ9NWT6 349 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 KLK9Q9UKQ9 250 aa8.32□□□□□ -1.08
VPS4B-206ENST00000591475 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 TRAV40A0A0B4J280 105 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 IGHV3-66A0A0C4DH42 116 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 DSCR9P59020 149 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 PHLDA1Q8WV24 401 aaPredicted RBP8.31□□□□□ -1.08
VPS4B-206ENST00000591475 PIMREGQ9BSJ6 248 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 NHP2Q9NX24 153 aaKnown RBP8.31□□□□□ -1.08
VPS4B-206ENST00000591475 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
VPS4B-206ENST00000591475 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 VPS13CQ709C8 3753 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 APCP25054 2843 aa8.31□□□□□ -1.08
VPS4B-206ENST00000591475 FASNP49327 2511 aaKnown RBP8.31□□□□□ -1.08
VPS4B-206ENST00000591475 A0A087WX48 190 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 IGHV7-4-1A0A0J9YVY3 117 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 CLPSL1A2RUU4 121 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 K7ERJ3 54 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 KRTAP10-9P60411 292 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 TAL2Q16559 108 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 IGHV4-4A0A075B6R2 117 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 TRAV8-2A0A0B4J237 113 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 ATP6V0E1O15342 81 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 PLNP26678 52 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 CLEC19AQ6UXS0 136 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 C9orf47Q6ZRZ4 202 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 C10orf105Q8TEF2 133 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 METTL26Q96S19 204 aa8.3□□□□□ -1.08
VPS4B-206ENST00000591475 BEX4Q9NWD9 120 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-206ENST00000591475 MAP1AP78559 2803 aaPredicted RBP8.29□□□□□ -1.08
VPS4B-206ENST00000591475 POLQO75417 2590 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 TRAV26-2A0A0B4J265 109 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 C8orf86Q6ZUL3 223 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 EEF1AKMT3Q96AZ1 226 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 MRAP2Q96G30 205 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 CCDC140Q96MF4 163 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 SIRPDQ9H106 197 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 NAV2Q8IVL1 2488 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 NBPF19A0A087WUL8 3843 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 IGHV3OR16-13A0A075B7E8 117 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 IGHV3-74A0A0B4J1X5 117 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 RPL24P83731 157 aaKnown RBP8.29□□□□□ -1.08
VPS4B-206ENST00000591475 DEFB113Q30KQ7 82 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 LRRC75A-AS1Q8N1F1 130 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 MAPKAPK5-AS1Q8N8E1 139 aa8.29□□□□□ -1.08
VPS4B-206ENST00000591475 ANKRD17O75179 2603 aaKnown RBP8.28□□□□□ -1.08
VPS4B-206ENST00000591475 TMEM238C9JI98 176 aa8.28□□□□□ -1.08
VPS4B-206ENST00000591475 E9PLD3 99 aa8.28□□□□□ -1.08
VPS4B-206ENST00000591475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.28□□□□□ -1.08
VPS4B-206ENST00000591475 ZFP36P26651 326 aaKnown RBP8.28□□□□□ -1.08
VPS4B-206ENST00000591475 LMO4P61968 165 aa8.28□□□□□ -1.08
VPS4B-206ENST00000591475 HIST2H2BCQ6DN03 193 aa8.28□□□□□ -1.08
VPS4B-206ENST00000591475 TRBV7-1A0A0A6YYK4 115 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 IGLL5B9A064 214 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 H7C1H1 209 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 SMIM2Q9BVW6 85 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 UNC79Q9P2D8 2635 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 IGHV4-30-2A0A087WSY4 118 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 IGHV3-49A0A0A0MS15 119 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 TEX48A0A1B0GUV7 120 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 H3BVH4 76 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 ZNF207O43670 478 aaKnown RBP8.27□□□□□ -1.09
VPS4B-206ENST00000591475 SLC25A16P16260 332 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 UBE2E1P51965 193 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 C12orf74Q32Q52 190 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 ZNF479Q96JC4 524 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 HIST1H4GQ99525 98 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 U3KQE9 123 aa8.27□□□□□ -1.09
VPS4B-206ENST00000591475 F8VRH5 84 aa8.26□□□□□ -1.09
VPS4B-206ENST00000591475 F8W1H4 67 aa8.26□□□□□ -1.09
VPS4B-206ENST00000591475 LINC01619G3V211 115 aa8.26□□□□□ -1.09
VPS4B-206ENST00000591475 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
VPS4B-206ENST00000591475 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
VPS4B-206ENST00000591475 C16orf92Q96LL3 132 aa8.26□□□□□ -1.09
VPS4B-206ENST00000591475 LENEPQ9Y5L5 61 aa8.26□□□□□ -1.09
VPS4B-206ENST00000591475 IGHV4-61A0A0C4DH41 118 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 G3V318 75 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 AJUBAQ96IF1 538 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 CHTOPQ9Y3Y2 248 aaKnown RBP8.25□□□□□ -1.09
VPS4B-206ENST00000591475 CSMD1Q96PZ7 3565 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 K7EMI3 77 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 ATP5G2Q06055 141 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 Q6ZQT7 251 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms