RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 LINC00467Q9BRT7 94 aa13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 GSN-AS1Q9NRJ2 163 aa13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 MDFICQ9P1T7 246 aa13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 TENM3Q9P273 2699 aa13.17□□□□□ -0.3
CROCCP3-205ENST00000591316 IGKV3D-20A0A0C4DH25 116 aa13.16□□□□□ -0.3
CROCCP3-205ENST00000591316 ZNF493Q6ZR52 646 aa13.16□□□□□ -0.3
CROCCP3-205ENST00000591316 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
CROCCP3-205ENST00000591316 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
CROCCP3-205ENST00000591316 TMEM189A5PLL7 270 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 LINC00862A6NCI5 91 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 B4DEV8 164 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 K7EN84 100 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 TYMSP04818 313 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 TMEM241Q24JQ0 296 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 TDRG1Q3Y452 100 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 NOP10Q9NPE3 64 aaKnown RBP13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 SNURFLB1AK76 121 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 FAM74A3Q4VXF1 159 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 C11orf68Q9H3H3 251 aaKnown RBP13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 EDA2RQ9HAV5 297 aa13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 TIMM8BQ9Y5J9 83 aaPredicted RBP13.15□□□□□ -0.3
CROCCP3-205ENST00000591316 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
CROCCP3-205ENST00000591316 GRIFINA4D1Z8 144 aa13.14□□□□□ -0.31
CROCCP3-205ENST00000591316 RPL19P84098 196 aaKnown RBP13.14□□□□□ -0.31
CROCCP3-205ENST00000591316 FAM222AQ5U5X8 452 aa13.14□□□□□ -0.31
CROCCP3-205ENST00000591316 BIN3Q9NQY0 253 aa13.14□□□□□ -0.31
CROCCP3-205ENST00000591316 CELA1Q9UNI1 258 aa13.14□□□□□ -0.31
CROCCP3-205ENST00000591316 CXorf65A6NEN9 183 aa13.13□□□□□ -0.31
CROCCP3-205ENST00000591316 KRBOX1C9JBD0 128 aa13.13□□□□□ -0.31
CROCCP3-205ENST00000591316 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
CROCCP3-205ENST00000591316 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
CROCCP3-205ENST00000591316 IGHV3-16A0A0C4DH30 117 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 SPART-AS1P0CW21 52 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 UQCC3Q6UW78 93 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 LINC01551Q86U37 167 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 C11orf45Q8TAV5 145 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 DKK2Q9UBU2 259 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 NAT8Q9UHE5 227 aa13.12□□□□□ -0.31
CROCCP3-205ENST00000591316 P01737 135 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 DEFB130BP0DP73 79 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 DEFB130AP0DP74 79 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 S100A4P26447 101 aaKnown RBP13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 NANOS2P60321 138 aaKnown RBP13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 IBA57Q5T440 356 aaKnown RBP13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 LY96Q9Y6Y9 160 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 C19orf71A6NCJ1 209 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 TCL1AP56279 114 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 ERVFC1-1P60608 527 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 ADIRFQ15847 76 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 LINC01559Q495D7 138 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
CROCCP3-205ENST00000591316 ASIPP42127 132 aa13.1□□□□□ -0.31
CROCCP3-205ENST00000591316 RPL23P62829 140 aaKnown RBP13.1□□□□□ -0.31
CROCCP3-205ENST00000591316 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
CROCCP3-205ENST00000591316 TMEM218A2RU14 115 aa13.09□□□□□ -0.31
CROCCP3-205ENST00000591316 TRGV1A0A0A0MS02 117 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 GAGE12BA1L429 117 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 LYRM9A8MSI8 78 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 GAGE7O76087 117 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 GZMBP10144 247 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 RNASE3P12724 160 aaKnown RBP13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 DAZ2Q13117 558 aaKnown RBP13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 C12orf74Q32Q52 190 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 Q6ZTI0 123 aa13.08□□□□□ -0.32
CROCCP3-205ENST00000591316 F8W036 122 aa13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 H3BVH4 76 aa13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 ARMS2P0C7Q2 107 aa13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 DAD1P61803 113 aa13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 WWC2-AS2Q96NR7 200 aa13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 MRPL16Q9NX20 251 aaKnown RBP13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 GATCO43716 136 aaKnown RBP13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 SPXQ9BT56 116 aa13.07□□□□□ -0.32
CROCCP3-205ENST00000591316 SPINK4O60575 86 aa13.06□□□□□ -0.32
CROCCP3-205ENST00000591316 SSTP61278 116 aa13.06□□□□□ -0.32
CROCCP3-205ENST00000591316 ISOC2Q96AB3 205 aa13.06□□□□□ -0.32
CROCCP3-205ENST00000591316 Q6ZTC4 211 aa13.05□□□□□ -0.32
CROCCP3-205ENST00000591316 C9orf85Q96MD7 179 aa13.05□□□□□ -0.32
CROCCP3-205ENST00000591316 TPPP3Q9BW30 176 aa13.05□□□□□ -0.32
CROCCP3-205ENST00000591316 RPP21Q9H633 154 aaKnown RBP13.05□□□□□ -0.32
CROCCP3-205ENST00000591316 TRGV2A0A075B6R0 118 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 MUC21A0A0G2JKD1 596 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 MUC21A0A140T8X8 626 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 TEX48A0A1B0GUV7 120 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 M0R2P5 195 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 ADCYAP1P18509 176 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 FAM231DQ6ZW35 169 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 SLC7A5P1Q8MH63 180 aa13.04□□□□□ -0.32
CROCCP3-205ENST00000591316 IL36BQ9NZH7 164 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms