RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 RBMY1CP0DJD4 496 aa12.03□□□□□ -0.48
GCDH-213ENST00000590627 RBMY1FQ15415 496 aaKnown RBP12.03□□□□□ -0.48
GCDH-213ENST00000590627 ADIRFQ15847 76 aa12.03□□□□□ -0.48
GCDH-213ENST00000590627 Q6ZQT7 251 aa12.03□□□□□ -0.48
GCDH-213ENST00000590627 FAM231DQ6ZW35 169 aa12.03□□□□□ -0.48
GCDH-213ENST00000590627 Q6ZWC4 215 aa12.03□□□□□ -0.48
GCDH-213ENST00000590627 C1orf158Q8N1D5 194 aa12.03□□□□□ -0.48
GCDH-213ENST00000590627 H7BYZ3 331 aa12.02□□□□□ -0.49
GCDH-213ENST00000590627 PRR27Q6MZM9 219 aa12.02□□□□□ -0.49
GCDH-213ENST00000590627 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.49
GCDH-213ENST00000590627 TDRG1Q3Y452 100 aa12.01□□□□□ -0.49
GCDH-213ENST00000590627 ZNF705AQ6ZN79 300 aaPredicted RBP12.01□□□□□ -0.49
GCDH-213ENST00000590627 NUDT10Q8NFP7 164 aa12.01□□□□□ -0.49
GCDH-213ENST00000590627 DAZAP1Q96EP5 407 aaKnown RBP12.01□□□□□ -0.49
GCDH-213ENST00000590627 NUDT11Q96G61 164 aa12.01□□□□□ -0.49
GCDH-213ENST00000590627 PYGO2Q9BRQ0 406 aa12.01□□□□□ -0.49
GCDH-213ENST00000590627 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
GCDH-213ENST00000590627 C11orf21Q9P2W6 132 aa12.01□□□□□ -0.49
GCDH-213ENST00000590627 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
GCDH-213ENST00000590627 B4DEV8 164 aa12□□□□□ -0.49
GCDH-213ENST00000590627 LINC01559Q495D7 138 aa12□□□□□ -0.49
GCDH-213ENST00000590627 SFRP2Q96HF1 295 aa12□□□□□ -0.49
GCDH-213ENST00000590627 RNASE7Q9H1E1 156 aaKnown RBP12□□□□□ -0.49
GCDH-213ENST00000590627 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
GCDH-213ENST00000590627 IGHV1OR15-1A0A075B7D0 117 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 IGKV3D-20A0A0C4DH25 116 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 P01737 135 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 APOC3P02656 99 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 ERVFC1-1P60608 527 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
GCDH-213ENST00000590627 SVBPQ8N300 66 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 RNF183Q96D59 192 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 LINC01587Q99440 93 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 RETNQ9HD89 108 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 TP53TG1Q9Y2A0 90 aa11.99□□□□□ -0.49
GCDH-213ENST00000590627 M0R036 132 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 ORM1P02763 201 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 DEFB135Q30KP9 77 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 FAM159AQ6UWV7 190 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 ZNF575Q86XF7 245 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 C15orf54Q8N8G6 183 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 CLRN3Q8NCR9 226 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 KCNS1Q96KK3 526 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 NEU1Q99519 415 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 TMEM208Q9BTX3 173 aa11.98□□□□□ -0.49
GCDH-213ENST00000590627 CXCL1P09341 107 aa11.97□□□□□ -0.49
GCDH-213ENST00000590627 CT83Q5H943 113 aa11.97□□□□□ -0.49
GCDH-213ENST00000590627 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
GCDH-213ENST00000590627 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
GCDH-213ENST00000590627 RPP21Q9H633 154 aaKnown RBP11.97□□□□□ -0.49
GCDH-213ENST00000590627 TMEM189A5PLL7 270 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 SMIM9A6NGZ8 99 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 PPP1R2P9O14990 202 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 SPRY2O43597 315 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 GATCO43716 136 aaKnown RBP11.96□□□□□ -0.49
GCDH-213ENST00000590627 SNAPINO95295 136 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 MT-ND4LP03901 98 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 RPS20P60866 119 aaKnown RBP11.96□□□□□ -0.49
GCDH-213ENST00000590627 RHEBQ15382 184 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 DNLZQ5SXM8 178 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 OR2D3Q8NGH3 330 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 NAGKQ9UJ70 344 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 V9GYV3 84 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 X6R8D5 127 aa11.96□□□□□ -0.49
GCDH-213ENST00000590627 IGHV3OR16-12A0A075B7B8 117 aa11.95□□□□□ -0.5
GCDH-213ENST00000590627 ZNF705GA8MUZ8 300 aaPredicted RBP11.95□□□□□ -0.5
GCDH-213ENST00000590627 RNF212Q495C1 297 aa11.95□□□□□ -0.5
GCDH-213ENST00000590627 ANAPC16Q96DE5 110 aa11.95□□□□□ -0.5
GCDH-213ENST00000590627 OVOL2Q9BRP0 275 aa11.95□□□□□ -0.5
GCDH-213ENST00000590627 TRGV11A0A075B6L2 103 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 XKRY2A2RUG3 117 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 C7orf77A4D0Y5 90 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 ATP6V1G1O75348 118 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 TYMSP04818 313 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 RPL19P84098 196 aaKnown RBP11.94□□□□□ -0.5
GCDH-213ENST00000590627 OR11H2Q8NH07 326 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 CTDSP1Q9GZU7 261 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 TP53TG3Q9ULZ0 132 aa11.94□□□□□ -0.5
GCDH-213ENST00000590627 A0A087WWC5 75 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 CBY3A6NI87 242 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 A8MWL6 223 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 GNRH2O43555 120 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 S100A1P23297 94 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 RRN3P1Q2M238 152 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 ZNF493Q6ZR52 646 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 RNASE8Q8TDE3 154 aaKnown RBP11.93□□□□□ -0.5
GCDH-213ENST00000590627 TMEM242Q9NWH2 141 aa11.93□□□□□ -0.5
GCDH-213ENST00000590627 TMSB15BA0A087X1C1 80 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 IGHV3-16A0A0C4DH30 117 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 PRM2P04554 102 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 HTN1P15515 57 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 AZU1P20160 251 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 ASIPP42127 132 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 C11orf72Q8NBR9 251 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 TSKUQ8WUA8 353 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
GCDH-213ENST00000590627 GFRA4Q9GZZ7 299 aa11.92□□□□□ -0.5
GCDH-213ENST00000590627 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms