RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 UBE2D2P62837 147 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 IGHV3-64A0A075B6Q5 118 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 ZNF833PQ6ZTB9 187 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 PRSS33Q8NF86 280 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 CD40P25942 277 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 Q1RN00 199 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 MRGPRG-AS1Q2M3A8 158 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 VMA21Q3ZAQ7 101 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 Q8N1Y9 231 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 CFC1BP0CG36 223 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 CFC1P0CG37 223 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 PLGLAQ15195 96 aa11.74□□□□□ -0.53
CIRBP-228ENST00000590347 NCOR2Q9Y618 2525 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 F8VRH5 84 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 IGKV3-15P01624 115 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 RNF182Q8N6D2 247 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 Q8N8P6 123 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 PRAC2D3DTV9 90 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 CD7P09564 240 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 UBE2D1P51668 147 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 SHISA9B4DS77 424 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 SHANK2-AS3Q9BTD1 123 aa11.73□□□□□ -0.53
CIRBP-228ENST00000590347 TRAV17A0A0B4J275 112 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 H7C1H1 209 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 CFHR4Q92496 578 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 ODF3Q96PU9 254 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 COL12A1Q99715 3063 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 IGLV2-18A0A075B6J9 118 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 PLNP26678 52 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 RASL10AQ92737 203 aa11.72□□□□□ -0.53
CIRBP-228ENST00000590347 FCN3O75636 299 aa11.71□□□□□ -0.53
CIRBP-228ENST00000590347 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
CIRBP-228ENST00000590347 ZNF56Q15929 161 aa11.71□□□□□ -0.53
CIRBP-228ENST00000590347 RNF7Q9UBF6 113 aa11.71□□□□□ -0.53
CIRBP-228ENST00000590347 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.53
CIRBP-228ENST00000590347 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
CIRBP-228ENST00000590347 TNFAIP6P98066 277 aaPredicted RBP11.71□□□□□ -0.53
CIRBP-228ENST00000590347 Q6ZT83 130 aa11.71□□□□□ -0.53
CIRBP-228ENST00000590347 CUBNO60494 3623 aa11.71□□□□□ -0.54
CIRBP-228ENST00000590347 BSNQ9UPA5 3926 aa11.71□□□□□ -0.54
CIRBP-228ENST00000590347 GLRXP35754 106 aa11.71□□□□□ -0.54
CIRBP-228ENST00000590347 IL17RELQ6ZVW7 336 aa11.71□□□□□ -0.54
CIRBP-228ENST00000590347 ZNF491Q8N8L2 437 aa11.71□□□□□ -0.54
CIRBP-228ENST00000590347 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.54
CIRBP-228ENST00000590347 DUX3Q96PT4 197 aa11.71□□□□□ -0.54
CIRBP-228ENST00000590347 DCHS2Q6V1P9 2916 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 COL6A6A6NMZ7 2263 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 FOXC1Q12948 553 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 TMEM200BQ69YZ2 307 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 C14orf178Q8N769 122 aaPredicted RBP11.7□□□□□ -0.54
CIRBP-228ENST00000590347 C11orf21Q9P2W6 132 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 TRAV8-4A0A0B4J246 113 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 FAM57AQ8TBR7 257 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 C21orf62Q9NYP8 219 aa11.7□□□□□ -0.54
CIRBP-228ENST00000590347 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
CIRBP-228ENST00000590347 TMEM14CQ9P0S9 112 aa11.69□□□□□ -0.54
CIRBP-228ENST00000590347 H3BRN7 92 aa11.69□□□□□ -0.54
CIRBP-228ENST00000590347 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
CIRBP-228ENST00000590347 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
CIRBP-228ENST00000590347 LYPD2Q6UXB3 125 aa11.69□□□□□ -0.54
CIRBP-228ENST00000590347 LHBP01229 141 aa11.69□□□□□ -0.54
CIRBP-228ENST00000590347 DYNAPQ8N1N2 210 aa11.69□□□□□ -0.54
CIRBP-228ENST00000590347 VCX2Q9H322 139 aa11.68□□□□□ -0.54
CIRBP-228ENST00000590347 DKK4Q9UBT3 224 aa11.68□□□□□ -0.54
CIRBP-228ENST00000590347 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
CIRBP-228ENST00000590347 NRACQ8N912 160 aa11.68□□□□□ -0.54
CIRBP-228ENST00000590347 PTPRQQ9UMZ3 2332 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 M0R381 172 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 COX7A1P24310 79 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 NPC2P61916 151 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 SEM1Q6ZVN7 128 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 C10orf126Q8N4M7 172 aa11.67□□□□□ -0.54
CIRBP-228ENST00000590347 A4D1N5 150 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
CIRBP-228ENST00000590347 SPTAN1Q13813 2472 aaKnown RBP11.66□□□□□ -0.54
CIRBP-228ENST00000590347 C11orf86A6NJI1 115 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 I3L2K1 104 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 IGHG3P01860 377 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 ASCL5Q7RTU5 278 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 CCL17Q92583 94 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 A0A0J9YY99 117 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 Q6ZSV7 163 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 C22orf34Q6ZV56 151 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 BAALCQ8WXS3 180 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 PRO1854Q9UHT4 67 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
CIRBP-228ENST00000590347 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
CIRBP-228ENST00000590347 MGPP08493 103 aa11.65□□□□□ -0.54
CIRBP-228ENST00000590347 DUSP14O95147 198 aaKnown RBP11.65□□□□□ -0.54
CIRBP-228ENST00000590347 K7EIM0 57 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms