RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 A0A0J9YWU9 116 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 B4DEV8 164 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 DEFB4AO15263 64 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 SFTA3P0C7M3 94 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 EMP1P54849 157 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 TMEM241Q24JQ0 296 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 TDRG1Q3Y452 100 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 OCC1Q8TAD7 63 aa9.81□□□□□ -0.84
VMP1-210ENST00000589823 SNURFLB1AK76 121 aa9.8□□□□□ -0.84
VMP1-210ENST00000589823 ZNF415Q09FC8 603 aa9.8□□□□□ -0.84
VMP1-210ENST00000589823 IBA57Q5T440 356 aaKnown RBP9.8□□□□□ -0.84
VMP1-210ENST00000589823 RNASE8Q8TDE3 154 aaKnown RBP9.8□□□□□ -0.84
VMP1-210ENST00000589823 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
VMP1-210ENST00000589823 NAT8Q9UHE5 227 aa9.8□□□□□ -0.84
VMP1-210ENST00000589823 TP53TG3Q9ULZ0 132 aa9.8□□□□□ -0.84
VMP1-210ENST00000589823 K7EN84 100 aa9.79□□□□□ -0.84
VMP1-210ENST00000589823 M0R036 132 aa9.79□□□□□ -0.84
VMP1-210ENST00000589823 OR5I1Q13606 314 aa9.79□□□□□ -0.84
VMP1-210ENST00000589823 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
VMP1-210ENST00000589823 TIMM8BQ9Y5J9 83 aaPredicted RBP9.79□□□□□ -0.84
VMP1-210ENST00000589823 IGKV3D-20A0A0C4DH25 116 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 TEX48A0A1B0GUV7 120 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 KRBOX1C9JBD0 128 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 GNRH2O43555 120 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 P01737 135 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 TYMSP04818 313 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
VMP1-210ENST00000589823 LINC01551Q86U37 167 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 GSN-AS1Q9NRJ2 163 aa9.78□□□□□ -0.84
VMP1-210ENST00000589823 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 SPART-AS1P0CW21 52 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 ASIPP42127 132 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 TCL1AP56279 114 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 ADIRFQ15847 76 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 C11orf72Q8NBR9 251 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.85
VMP1-210ENST00000589823 MDFICQ9P1T7 246 aa9.77□□□□□ -0.85
VMP1-210ENST00000589823 TENM3Q9P273 2699 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 XKRY2A2RUG3 117 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 CXorf65A6NEN9 183 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 LYRM9A8MSI8 78 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 RPS20P60866 119 aaKnown RBP9.76□□□□□ -0.85
VMP1-210ENST00000589823 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
VMP1-210ENST00000589823 RPL19P84098 196 aaKnown RBP9.76□□□□□ -0.85
VMP1-210ENST00000589823 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
VMP1-210ENST00000589823 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 NUDT10Q8NFP7 164 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 OR2D3Q8NGH3 330 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 NUDT11Q96G61 164 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 RNASE7Q9H1E1 156 aaKnown RBP9.76□□□□□ -0.85
VMP1-210ENST00000589823 EDA2RQ9HAV5 297 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 COL7A1Q02388 2944 aa9.76□□□□□ -0.85
VMP1-210ENST00000589823 GRIFINA4D1Z8 144 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 F8W036 122 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 GATCO43716 136 aaKnown RBP9.75□□□□□ -0.85
VMP1-210ENST00000589823 CXCL1P09341 107 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 ERVFC1-1P60608 527 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 FAM231DQ6ZW35 169 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 IL17DQ8TAD2 202 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 C11orf45Q8TAV5 145 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 SPXQ9BT56 116 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 DKK2Q9UBU2 259 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 CELA1Q9UNI1 258 aa9.75□□□□□ -0.85
VMP1-210ENST00000589823 PNRC1Q12796 327 aaPredicted RBP9.74□□□□□ -0.85
VMP1-210ENST00000589823 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
VMP1-210ENST00000589823 C15orf54Q8N8G6 183 aa9.74□□□□□ -0.85
VMP1-210ENST00000589823 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
VMP1-210ENST00000589823 RPP21Q9H633 154 aaKnown RBP9.74□□□□□ -0.85
VMP1-210ENST00000589823 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
VMP1-210ENST00000589823 H3BVH4 76 aa9.73□□□□□ -0.85
VMP1-210ENST00000589823 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
VMP1-210ENST00000589823 DAD1P61803 113 aa9.73□□□□□ -0.85
VMP1-210ENST00000589823 SFRP2Q96HF1 295 aa9.73□□□□□ -0.85
VMP1-210ENST00000589823 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
VMP1-210ENST00000589823 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
VMP1-210ENST00000589823 IL36BQ9NZH7 164 aa9.73□□□□□ -0.85
VMP1-210ENST00000589823 GAGE12BA1L429 117 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 M0R2P5 195 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 SPINK4O60575 86 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 GAGE7O76087 117 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 ARMS2P0C7Q2 107 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 GAGE12FP0CL80 117 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 GAGE12GP0CL81 117 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 GAGE12IP0CL82 117 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 DEFB130BP0DP73 79 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 DEFB130AP0DP74 79 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 ADCYAP1P18509 176 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
VMP1-210ENST00000589823 NDUFA5Q16718 116 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 LGALS9BQ3B8N2 356 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 C9orf85Q96MD7 179 aa9.72□□□□□ -0.85
VMP1-210ENST00000589823 MED14OSP0DP75 135 aa9.71□□□□□ -0.86
VMP1-210ENST00000589823 GZMBP10144 247 aa9.71□□□□□ -0.86
VMP1-210ENST00000589823 Q6ZTI0 123 aa9.71□□□□□ -0.86
VMP1-210ENST00000589823 ZNF575Q86XF7 245 aa9.71□□□□□ -0.86
VMP1-210ENST00000589823 OR10G8Q8NGN5 311 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms