RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 PATE1Q8WXA2 126 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 TEX37Q96LM6 180 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 YPEL2Q96QA6 119 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 ACER3Q9NUN7 267 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 RASL12Q9NYN1 266 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 NFAT5O94916 1531 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 KIF1BO60333 1816 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 PHIPQ8WWQ0 1821 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 TNRC6BQ9UPQ9 1833 aaKnown RBP0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 CACNA1HO95180 2353 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 F8P00451 2351 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 LOC285556D6RIA3 1793 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 MUC22E2RYF6 1773 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 ARFGEF2Q9Y6D5 1785 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 PCNX1Q96RV3 2341 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 DAPK1P53355 1430 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 ANKARQ7Z5J8 1434 aa0.47□□□□□ -2.33
HMGN1P30-201ENST00000589286 ZFC3H1O60293 1989 aaKnown RBP0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 EML5Q05BV3 1969 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 MGAM2Q2M2H8 2515 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 KTN1Q86UP2 1357 aaKnown RBP0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 FSIP2Q5CZC0 6907 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 DNAH17Q9UFH2 4485 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 PLXNB2O15031 1838 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 A8MWV9 139 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 ZNF736B4DX44 427 aaPredicted RBP0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 TAX1BP3O14907 124 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 GADD45GO95257 159 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 IFNA7P01567 189 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 RHOBP62745 196 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 TAF1AQ15573 450 aaPredicted RBP0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 SOSTDC1Q6X4U4 206 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 PDZD9Q8IXQ8 264 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 EXOC3-AS1Q8N2X6 119 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 LINC00467Q9BRT7 94 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 C6orf62Q9GZU0 229 aaPredicted RBP0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 VPS13BQ7Z7G8 4022 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 DNAH11Q96DT5 4516 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 EML6Q6ZMW3 1958 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 SCN10AQ9Y5Y9 1956 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 HIVEP3Q5T1R4 2406 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 APOBP04114 4563 aaKnown RBP0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 ATG2AQ2TAZ0 1938 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 PKHD1L1Q86WI1 4243 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 PLXNA4Q9HCM2 1894 aa0.46□□□□□ -2.34
HMGN1P30-201ENST00000589286 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 ANKRD30AQ9BXX3 1397 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 LAMA4Q16363 1823 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 SPEF2Q9C093 1822 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 DOCK3Q8IZD9 2030 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 TCRBV4S1A1TA0A5B7 111 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 B4DSR2 109 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 HMGB3O15347 200 aaKnown RBP0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 CCL16O15467 120 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 NDUFB3O43676 98 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 TIMM17BO60830 172 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 UBE2BP63146 152 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 MPV17LQ2QL34 196 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 BCL2L15Q5TBC7 163 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 GDF5OSQ5U4N7 250 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 KRTAP26-1Q6PEX3 210 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 TEX261Q6UWH6 196 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 CLECL1Q8IZS7 167 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 OR10K1Q8NGX5 313 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 CANT1Q8WVQ1 401 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 GPER1Q99527 375 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 PHB2Q99623 299 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 PSTPIP2Q9H939 334 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 CDC42SE1Q9NRR8 79 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 PRNDQ9UKY0 176 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 PYCARDQ9ULZ3 195 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 U3KQ87 197 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 CD163L1Q9NR16 1453 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 ZNF106Q9H2Y7 1883 aaKnown RBP0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 EDC4Q6P2E9 1401 aaKnown RBP0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 ASXL3Q9C0F0 2248 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 A0A1B0GUL6 1792 aa0.45□□□□□ -2.34
HMGN1P30-201ENST00000589286 DOCK5Q9H7D0 1870 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 MYO7AQ13402 2215 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 PATJQ8NI35 1801 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 A0A087WSZ3 146 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 CCDC160A6NGH7 325 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 TMEM256-PLSCR3K7ERE1 68 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 CCL25O15444 150 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 GGCTO75223 188 aaKnown RBP0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 HLA-EP13747 358 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 DSCR4P56555 118 aaPredicted RBP0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 NCALDP61601 193 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 HACD4Q5VWC8 232 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 PATE2Q6UY27 113 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 OR2T35Q8NGX2 323 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 TMEM254Q8TBM7 123 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 SLC25A21Q9BQT8 299 aaPredicted RBP0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 MYOM3Q5VTT5 1437 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 SMG6Q86US8 1419 aaKnown RBP0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 SNRNP200O75643 2136 aaKnown RBP0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 LRP1BQ9NZR2 4599 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 PLXND1Q9Y4D7 1925 aa0.44□□□□□ -2.34
HMGN1P30-201ENST00000589286 ACANP16112 2415 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms