RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 C16orf74Q96GX8 76 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 SMDT1Q9H4I9 107 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 GSN-AS1Q9NRJ2 163 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 TMEM189A5PLL7 270 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 ZNF727A8MUV8 499 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 K7EN84 100 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 FAM222AQ5U5X8 452 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 ZNF493Q6ZR52 646 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 SMIM12Q96EX1 92 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 SMIM7Q9BQ49 75 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 MDFICQ9P1T7 246 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 DKK2Q9UBU2 259 aa7.65□□□□□ -1.18
SMARCA4-213ENST00000587988 IGHV3-16A0A0C4DH30 117 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 KRBOX1C9JBD0 128 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 M0R036 132 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 ORM1P02763 201 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 NANOS2P60321 138 aaKnown RBP7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 RPL19P84098 196 aaKnown RBP7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 COMMD7Q86VX2 200 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 IL17DQ8TAD2 202 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 KCNS1Q96KK3 526 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 SDF2L1Q9HCN8 221 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 NOP10Q9NPE3 64 aaKnown RBP7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 TGP01266 2768 aa7.64□□□□□ -1.19
SMARCA4-213ENST00000587988 TRGV11A0A075B6L2 103 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 TMSB15BA0A087X1C1 80 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 LINC00862A6NCI5 91 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 C19orf71A6NCJ1 209 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 CXorf65A6NEN9 183 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 SNURFLB1AK76 121 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 B4DEV8 164 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 TCL1AP56279 114 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 ZNF415Q09FC8 603 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 C12orf74Q32Q52 190 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 LINC01559Q495D7 138 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 IBA57Q5T440 356 aaKnown RBP7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 C11orf45Q8TAV5 145 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 WWC2-AS2Q96NR7 200 aa7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 TIMM8BQ9Y5J9 83 aaPredicted RBP7.63□□□□□ -1.19
SMARCA4-213ENST00000587988 GRIFINA4D1Z8 144 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 SFTA3P0C7M3 94 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 SPART-AS1P0CW21 52 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 RNASE3P12724 160 aaKnown RBP7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 DAZ2Q13117 558 aaKnown RBP7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 FAM74A3Q4VXF1 159 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 SOHLH1Q5JUK2 328 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 LINC01551Q86U37 167 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 NUDT10Q8NFP7 164 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 NUDT11Q96G61 164 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 RNASE7Q9H1E1 156 aaKnown RBP7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 LY96Q9Y6Y9 160 aa7.62□□□□□ -1.19
SMARCA4-213ENST00000587988 LYRM9A8MSI8 78 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 DEFB130BP0DP73 79 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 DEFB130AP0DP74 79 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 RPL23P62829 140 aaKnown RBP7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 TMEM241Q24JQ0 296 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 Q6ZTI0 123 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 LINC00612Q8N6U2 182 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 DAZAP1Q96EP5 407 aaKnown RBP7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 C9orf85Q96MD7 179 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 BIN3Q9NQY0 253 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 NAT8Q9UHE5 227 aa7.61□□□□□ -1.19
SMARCA4-213ENST00000587988 MUC4Q99102 2169 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 TRGV1A0A0A0MS02 117 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 GAGE12BA1L429 117 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 H3BVH4 76 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 SPINK4O60575 86 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 GAGE7O76087 117 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 P01737 135 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 ASIPP42127 132 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 DAD1P61803 113 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 DNLZQ5SXM8 178 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 UQCC3Q6UW78 93 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 Q6ZTC4 211 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 OR2D3Q8NGH3 330 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 SPXQ9BT56 116 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 MRPL16Q9NX20 251 aaKnown RBP7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
SMARCA4-213ENST00000587988 TEX48A0A1B0GUV7 120 aa7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 ARMS2P0C7Q2 107 aa7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 GZMBP10144 247 aa7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 ADCYAP1P18509 176 aa7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 S100A4P26447 101 aaKnown RBP7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 ADIRFQ15847 76 aa7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 ISOC2Q96AB3 205 aa7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 DNAH7Q8WXX0 4024 aa7.59□□□□□ -1.19
SMARCA4-213ENST00000587988 TMEM218A2RU14 115 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 M0R2P5 195 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 CXCL1P09341 107 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 ERVFC1-1P60608 527 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 LGALS9BQ3B8N2 356 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 ZFAND6Q6FIF0 208 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 FAM231DQ6ZW35 169 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 MUC7Q8TAX7 377 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 RPP21Q9H633 154 aaKnown RBP7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 IL36BQ9NZH7 164 aa7.58□□□□□ -1.2
SMARCA4-213ENST00000587988 MUC21A0A0G2JKD1 596 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms