RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 IGHV1-24A0A0C4DH33 117 aa19.25■□□□□ 0.67
CAPNS1-204ENST00000587718 PPBPP02775 128 aa19.25■□□□□ 0.67
CAPNS1-204ENST00000587718 HSPB8Q9UJY1 196 aa19.25■□□□□ 0.67
CAPNS1-204ENST00000587718 LAMTOR2Q9Y2Q5 125 aa19.25■□□□□ 0.67
CAPNS1-204ENST00000587718 IGHV3-66A0A0C4DH42 116 aa19.24■□□□□ 0.67
CAPNS1-204ENST00000587718 ERCC8Q13216 396 aa19.24■□□□□ 0.67
CAPNS1-204ENST00000587718 EBLN2Q6P2I7 272 aa19.24■□□□□ 0.67
CAPNS1-204ENST00000587718 ORMDL3Q8N138 153 aa19.24■□□□□ 0.67
CAPNS1-204ENST00000587718 RNF182Q8N6D2 247 aa19.24■□□□□ 0.67
CAPNS1-204ENST00000587718 TGP01266 2768 aa19.24■□□□□ 0.67
CAPNS1-204ENST00000587718 SOCS3O14543 225 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 LEPROTL1O95214 131 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 ORM1P02763 201 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 C11orf44Q8N8P7 122 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 TPPP3Q9BW30 176 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 ZNF207O43670 478 aaKnown RBP19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 ZNF575Q86XF7 245 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 AP5S1Q9NUS5 200 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 PAM16Q9Y3D7 125 aa19.23■□□□□ 0.67
CAPNS1-204ENST00000587718 TMSB15BA0A087X1C1 80 aa19.22■□□□□ 0.67
CAPNS1-204ENST00000587718 IGHV7-4-1A0A0J9YVY3 117 aa19.22■□□□□ 0.67
CAPNS1-204ENST00000587718 FOXE3Q13461 319 aa19.22■□□□□ 0.67
CAPNS1-204ENST00000587718 UNQ9165/PRO28630Q6UXU0 137 aa19.22■□□□□ 0.67
CAPNS1-204ENST00000587718 GPHB5Q86YW7 130 aa19.22■□□□□ 0.67
CAPNS1-204ENST00000587718 KLK15Q9H2R5 256 aa19.22■□□□□ 0.67
CAPNS1-204ENST00000587718 PEF1Q9UBV8 284 aaKnown RBP19.22■□□□□ 0.67
CAPNS1-204ENST00000587718 M0R143 59 aa19.21■□□□□ 0.67
CAPNS1-204ENST00000587718 PSMB8P28062 276 aa19.21■□□□□ 0.67
CAPNS1-204ENST00000587718 FAM106AQ4KMX7 169 aa19.21■□□□□ 0.67
CAPNS1-204ENST00000587718 PET117Q6UWS5 81 aa19.21■□□□□ 0.67
CAPNS1-204ENST00000587718 FA2HQ7L5A8 372 aa19.21■□□□□ 0.67
CAPNS1-204ENST00000587718 DAZ1Q9NQZ3 744 aaKnown RBP19.21■□□□□ 0.67
CAPNS1-204ENST00000587718 PRKDCP78527 4128 aaKnown RBP19.2■□□□□ 0.66
CAPNS1-204ENST00000587718 TRBV12-3P01733 135 aa19.2■□□□□ 0.66
CAPNS1-204ENST00000587718 TDRG1Q3Y452 100 aa19.2■□□□□ 0.66
CAPNS1-204ENST00000587718 Q6ZS46 218 aa19.2■□□□□ 0.66
CAPNS1-204ENST00000587718 IGHV3OR16-13A0A075B7E8 117 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 TRAV9-2A0A087WT02 112 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 IGHV3-74A0A0B4J1X5 117 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 TMEM213A2RRL7 107 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 SPATA45Q537H7 98 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 PRELID3AQ96N28 172 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 IGHV4-4A0A075B6R2 117 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 IGHV3-49A0A0A0MS15 119 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 TWIST1Q15672 202 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 MRPL51Q4U2R6 128 aaKnown RBP19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 OR10J6PQ8NGY7 276 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 PRSS3P2Q8NHM4 247 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 UQCR10Q9UDW1 63 aa19.19■□□□□ 0.66
CAPNS1-204ENST00000587718 SYS1-DBNDD2H3BUS1 97 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 CACNG7P62955 275 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 SPATA12Q7Z6I5 190 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 ZNF738Q8NE65 137 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 OR10AG1Q8NH19 301 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 MAP1LC3CQ9BXW4 147 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 SMPXQ9UHP9 88 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 UFC1Q9Y3C8 167 aa19.18■□□□□ 0.66
CAPNS1-204ENST00000587718 APRG1Q8IVJ8 170 aa19.17■□□□□ 0.66
CAPNS1-204ENST00000587718 D6R8Y8 96 aa19.16■□□□□ 0.66
CAPNS1-204ENST00000587718 CD28P10747 220 aa19.16■□□□□ 0.66
CAPNS1-204ENST00000587718 AMN1Q8IY45 258 aa19.16■□□□□ 0.66
CAPNS1-204ENST00000587718 IGKV3D-20A0A0C4DH25 116 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 ADARB2-AS1A8MUL3 147 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 SNAI2O43623 268 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 IGHV3-11P01762 117 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 RHPN1-AS1Q9BWJ2 59 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 G3V4G9 280 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 ELANEP08246 267 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 IGLC3P0DOY3 106 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 MED14OSP0DP75 135 aa19.15■□□□□ 0.66
CAPNS1-204ENST00000587718 LINC01546A6NGU7 62 aa19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 PRB4P10163 310 aaPredicted RBP19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 BEAN1Q3B7T3 259 aa19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 KPRPQ5T749 579 aaPredicted RBP19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 SAMD5Q5TGI4 173 aa19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 ZNF705AQ6ZN79 300 aaPredicted RBP19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 C20orf173Q96LM9 149 aa19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 FAM19A4Q96LR4 140 aa19.14■□□□□ 0.65
CAPNS1-204ENST00000587718 CKS2P33552 79 aa19.13■□□□□ 0.65
CAPNS1-204ENST00000587718 MYOZ3Q8TDC0 251 aa19.13■□□□□ 0.65
CAPNS1-204ENST00000587718 TRAV21A0A0B4J279 112 aa19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 ID1P41134 155 aa19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 TMEM95Q3KNT9 176 aa19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 SMIM15Q7Z3B0 74 aa19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 NDUFA11Q86Y39 141 aa19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 DEFB125Q8N687 156 aa19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 CITED2Q99967 270 aaPredicted RBP19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 SIGLEC8Q9NYZ4 499 aa19.12■□□□□ 0.65
CAPNS1-204ENST00000587718 NSUN5P1Q3KNT7 163 aa19.11■□□□□ 0.65
CAPNS1-204ENST00000587718 RNF152Q8N8N0 203 aa19.11■□□□□ 0.65
CAPNS1-204ENST00000587718 RNF185Q96GF1 192 aa19.11■□□□□ 0.65
CAPNS1-204ENST00000587718 SNHG12Q9BXW3 62 aa19.11■□□□□ 0.65
CAPNS1-204ENST00000587718 CSN3P07498 182 aa19.1■□□□□ 0.65
CAPNS1-204ENST00000587718 ST20Q9HBF5 79 aa19.1■□□□□ 0.65
CAPNS1-204ENST00000587718 C11orf21Q9P2W6 132 aa19.1■□□□□ 0.65
CAPNS1-204ENST00000587718 ZFAND2AQ8N6M9 145 aa19.1■□□□□ 0.65
CAPNS1-204ENST00000587718 OR8A1Q8NGG7 326 aa19.1■□□□□ 0.65
CAPNS1-204ENST00000587718 PRSS47A8MTI9 375 aa19.09■□□□□ 0.65
CAPNS1-204ENST00000587718 LGALS9O00182 355 aa19.09■□□□□ 0.65
CAPNS1-204ENST00000587718 LINC01545Q5VT33 79 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 368.8 ms