RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 DKK2Q9UBU2 259 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 PSG8Q9UQ74 426 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 TRAV21A0A0B4J279 112 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 TRBV6-1A0A0K0K1D8 114 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 PLAC8L1A1L4L8 177 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 CXorf65A6NEN9 183 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 NUPR2A6NF83 97 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 LYRM9A8MSI8 78 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 C11orf94C9JXX5 98 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 TNFRSF6BO95407 300 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 IFNA1P01562 189 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 S100A9P06702 114 aaKnown RBP5.73□□□□□ -1.49
SMAD4-204ENST00000586253 ATP5G3P48201 142 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 NANOS2P60321 138 aaKnown RBP5.73□□□□□ -1.49
SMAD4-204ENST00000586253 BLOC1S1P78537 153 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 ANXA2RQ3ZCQ2 193 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 EIF4E3Q8N5X7 224 aaKnown RBP5.73□□□□□ -1.49
SMAD4-204ENST00000586253 LYPD6BQ8NI32 183 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 TVP23CQ96ET8 276 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 FMC1Q96HJ9 113 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 GNG13Q9P2W3 67 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 KLF12Q9Y4X4 402 aa5.73□□□□□ -1.49
SMAD4-204ENST00000586253 IGHV1OR15-1A0A075B7D0 117 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 PRM2P04554 102 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 HTN1P15515 57 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 AZU1P20160 251 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 BTF3P20290 206 aaKnown RBP5.72□□□□□ -1.49
SMAD4-204ENST00000586253 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 EMP1P54849 157 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 UBE2G1P62253 170 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 CCL20P78556 96 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 TMEM183BQ1AE95 376 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 C12orf74Q32Q52 190 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 TDRG1Q3Y452 100 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 SMUG1Q53HV7 270 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 IBA57Q5T440 356 aaKnown RBP5.72□□□□□ -1.49
SMAD4-204ENST00000586253 FAM222AQ5U5X8 452 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 COX8CQ7Z4L0 72 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 PRNTQ86SH4 94 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 Q86TA4 180 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 C2CD4CQ8TF44 421 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 PHLDA1Q8WV24 401 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-204ENST00000586253 SGK494Q96LW2 274 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 LINC00479Q96M42 142 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 CELA1Q9UNI1 258 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 ZFP30Q9Y2G7 519 aa5.72□□□□□ -1.49
SMAD4-204ENST00000586253 TIMM8BQ9Y5J9 83 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-204ENST00000586253 TRAV34A0A0B4J273 112 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 CBY3A6NI87 242 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 PDE6DO43924 150 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 LTAP01374 205 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 PFN1P07737 140 aaKnown RBP5.71□□□□□ -1.5
SMAD4-204ENST00000586253 BCL2P10415 239 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 AKR1C3P42330 323 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 MEF2BQ02080 365 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-204ENST00000586253 DAZ2Q13117 558 aaKnown RBP5.71□□□□□ -1.5
SMAD4-204ENST00000586253 ZFAND6Q6FIF0 208 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 CEMP1Q6PRD7 247 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-204ENST00000586253 TEX261Q6UWH6 196 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 FAM159AQ6UWV7 190 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 C11orf72Q8NBR9 251 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 C11orf52Q96A22 123 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 TP53TG3Q9ULZ0 132 aa5.71□□□□□ -1.5
SMAD4-204ENST00000586253 KLK5Q9Y337 293 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-204ENST00000586253 TRGV11A0A075B6L2 103 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 TRAV10A0A0B4J240 114 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 SNURFLB1AK76 121 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 GCGP01275 180 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 TCL1AP56279 114 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 DAD1P61803 113 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 Q6ZQT7 251 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 Q6ZTC4 211 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 TMEM183AQ8IXX5 376 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 LINC00612Q8N6U2 182 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 KCNS1Q96KK3 526 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 SDF2L1Q9HCN8 221 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 VAX2Q9UIW0 290 aa5.7□□□□□ -1.5
SMAD4-204ENST00000586253 STARD9Q9P2P6 4700 aa5.69□□□□□ -1.5
SMAD4-204ENST00000586253 NDUFS6O75380 124 aaKnown RBP5.69□□□□□ -1.5
SMAD4-204ENST00000586253 ZNF80P51504 273 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-204ENST00000586253 TCTAP57738 103 aa5.69□□□□□ -1.5
SMAD4-204ENST00000586253 ZNF415Q09FC8 603 aa5.69□□□□□ -1.5
SMAD4-204ENST00000586253 LGALS9BQ3B8N2 356 aa5.69□□□□□ -1.5
SMAD4-204ENST00000586253 MUC21Q5SSG8 566 aa5.69□□□□□ -1.5
SMAD4-204ENST00000586253 C18orf15Q96N68 181 aa5.69□□□□□ -1.5
SMAD4-204ENST00000586253 NOP10Q9NPE3 64 aaKnown RBP5.69□□□□□ -1.5
SMAD4-204ENST00000586253 GSN-AS1Q9NRJ2 163 aa5.69□□□□□ -1.5
SMAD4-204ENST00000586253 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 RBFOX3A6NFN3 312 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 FABP5P3A8MUU1 101 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 SPINK4O60575 86 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 RPL35P42766 123 aaKnown RBP5.68□□□□□ -1.5
SMAD4-204ENST00000586253 ZNF674Q2M3X9 581 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 FAM162BQ5T6X4 162 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 ZNF767PQ75MW2 155 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 BAGE2Q86Y30 109 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 SMIM12Q96EX1 92 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 ZC2HC1AQ96GY0 325 aa5.68□□□□□ -1.5
SMAD4-204ENST00000586253 FAM210BQ96KR6 192 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms