RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 M0R036 132 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 NDUFS6O75380 124 aaKnown RBP9.33□□□□□ -0.92
ERBB2-215ENST00000583391 IGLV2-8P01709 118 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 TYMSP04818 313 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 ZNF415Q09FC8 603 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 IL17DQ8TAD2 202 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 SDF2L1Q9HCN8 221 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 NACAE9PAV3 2078 aa9.33□□□□□ -0.92
ERBB2-215ENST00000583391 CSMD3Q7Z407 3707 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 CXorf65A6NEN9 183 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 C9JCJ5 164 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 ORM1P02763 201 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 NANOS2P60321 138 aaKnown RBP9.32□□□□□ -0.92
ERBB2-215ENST00000583391 TDRG1Q3Y452 100 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 KCNS1Q96KK3 526 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 NOP10Q9NPE3 64 aaKnown RBP9.32□□□□□ -0.92
ERBB2-215ENST00000583391 GSN-AS1Q9NRJ2 163 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
ERBB2-215ENST00000583391 TIMM8BQ9Y5J9 83 aaPredicted RBP9.32□□□□□ -0.92
ERBB2-215ENST00000583391 TENM2Q9NT68 2774 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 IGKV3D-20A0A0C4DH25 116 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 ZNF727A8MUV8 499 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 B4DEV8 164 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 GNRH2O43555 120 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 SPART-AS1P0CW21 52 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 TCL1AP56279 114 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
ERBB2-215ENST00000583391 SMIM12Q96EX1 92 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 MDFICQ9P1T7 246 aa9.31□□□□□ -0.92
ERBB2-215ENST00000583391 DYNC2H1Q8NCM8 4307 aaKnown RBP9.3□□□□□ -0.92
ERBB2-215ENST00000583391 STARD9Q9P2P6 4700 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 IGHV3-16A0A0C4DH30 117 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 LYRM9A8MSI8 78 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 K7EN84 100 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 OR5I1Q13606 314 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 LINC01559Q495D7 138 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 SMDT1Q9H4I9 107 aa9.3□□□□□ -0.92
ERBB2-215ENST00000583391 KRBOX1C9JBD0 128 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 DEFB130BP0DP73 79 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 DEFB130AP0DP74 79 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 DAD1P61803 113 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
ERBB2-215ENST00000583391 Q6ZTC4 211 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 MUC7Q8TAX7 377 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 BIN3Q9NQY0 253 aa9.29□□□□□ -0.92
ERBB2-215ENST00000583391 MRPL16Q9NX20 251 aaKnown RBP9.29□□□□□ -0.92
ERBB2-215ENST00000583391 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 GRIFINA4D1Z8 144 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 H3BVH4 76 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 SFTA3P0C7M3 94 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 S100A4P26447 101 aaKnown RBP9.28□□□□□ -0.92
ERBB2-215ENST00000583391 ASIPP42127 132 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 DAZ2Q13117 558 aaKnown RBP9.28□□□□□ -0.92
ERBB2-215ENST00000583391 C12orf74Q32Q52 190 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 ZFAND6Q6FIF0 208 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 Q6ZTI0 123 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 COMMD7Q86VX2 200 aa9.28□□□□□ -0.92
ERBB2-215ENST00000583391 DAZAP1Q96EP5 407 aaKnown RBP9.28□□□□□ -0.92
ERBB2-215ENST00000583391 GAGE12BA1L429 117 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 GAGE7O76087 117 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 P01737 135 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 GAGE12FP0CL80 117 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 GAGE12GP0CL81 117 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 GAGE12IP0CL82 117 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 SOHLH1Q5JUK2 328 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 LINC01551Q86U37 167 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 RNASE7Q9H1E1 156 aaKnown RBP9.27□□□□□ -0.93
ERBB2-215ENST00000583391 LY96Q9Y6Y9 160 aa9.27□□□□□ -0.93
ERBB2-215ENST00000583391 SPINK4O60575 86 aa9.26□□□□□ -0.93
ERBB2-215ENST00000583391 RNASE3P12724 160 aaKnown RBP9.26□□□□□ -0.93
ERBB2-215ENST00000583391 HTN3P15516 51 aa9.26□□□□□ -0.93
ERBB2-215ENST00000583391 OR2D3Q8NGH3 330 aa9.26□□□□□ -0.93
ERBB2-215ENST00000583391 C9orf85Q96MD7 179 aa9.26□□□□□ -0.93
ERBB2-215ENST00000583391 SPXQ9BT56 116 aa9.26□□□□□ -0.93
ERBB2-215ENST00000583391 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
ERBB2-215ENST00000583391 M0R2P5 195 aa9.25□□□□□ -0.93
ERBB2-215ENST00000583391 ADIRFQ15847 76 aa9.25□□□□□ -0.93
ERBB2-215ENST00000583391 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
ERBB2-215ENST00000583391 LINC00612Q8N6U2 182 aa9.25□□□□□ -0.93
ERBB2-215ENST00000583391 PHLDA1Q8WV24 401 aaPredicted RBP9.25□□□□□ -0.93
ERBB2-215ENST00000583391 PLECQ15149 4684 aaKnown RBP9.24□□□□□ -0.93
ERBB2-215ENST00000583391 TRGV2A0A075B6R0 118 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 TRAV10A0A0B4J240 114 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 LINC00862A6NCI5 91 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 GZMBP10144 247 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
ERBB2-215ENST00000583391 UQCC3Q6UW78 93 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 NUDT10Q8NFP7 164 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 NUDT11Q96G61 164 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 RPP21Q9H633 154 aaKnown RBP9.24□□□□□ -0.93
ERBB2-215ENST00000583391 IL36BQ9NZH7 164 aa9.24□□□□□ -0.93
ERBB2-215ENST00000583391 DEFB131BA0A096LNP1 70 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms