RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
SENP3-208ENST00000583277 KRTAP21-3Q3LHN1 58 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 FAM159AQ6UWV7 190 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 C1QTNF4Q9BXJ3 329 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
SENP3-208ENST00000583277 RPL35AP18077 110 aaKnown RBP10.74□□□□□ -0.69
SENP3-208ENST00000583277 FOXA3P55318 350 aaPredicted RBP10.74□□□□□ -0.69
SENP3-208ENST00000583277 TDRG1Q3Y452 100 aa10.74□□□□□ -0.69
SENP3-208ENST00000583277 Q8N1Y9 231 aa10.74□□□□□ -0.69
SENP3-208ENST00000583277 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
SENP3-208ENST00000583277 GZMBP10144 247 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 SAMD5Q5TGI4 173 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 Q6ZQT7 251 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 TMEM256Q8N2U0 113 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
SENP3-208ENST00000583277 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 TGIF2-C20orf24A0A0A6YYL0 155 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 COLCA2A8K830 154 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 FER1L6-AS1Q8NA97 138 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 XCL2Q9UBD3 114 aa10.73□□□□□ -0.69
SENP3-208ENST00000583277 NBEAL1Q6ZS30 2694 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 IGHV1OR15-1A0A075B7D0 117 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 G3V4G9 280 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 CTRLP40313 264 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 ASIPP42127 132 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 KRTAP10-11P60412 298 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 ATP5L2Q7Z4Y8 100 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 BORCS7Q96B45 105 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 FAM210BQ96KR6 192 aa10.72□□□□□ -0.69
SENP3-208ENST00000583277 LOC102724200A0A096LPH7 203 aaPredicted RBP10.71□□□□□ -0.69
SENP3-208ENST00000583277 GRIFINA4D1Z8 144 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 F2Z2F3 143 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 TYMSP04818 313 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 IGLC6P0CF74 106 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 RBMY1A1P0DJD3 496 aaKnown RBP10.71□□□□□ -0.69
SENP3-208ENST00000583277 RBMY1CP0DJD4 496 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 MED14OSP0DP75 135 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 RBMY1FQ15415 496 aaKnown RBP10.71□□□□□ -0.69
SENP3-208ENST00000583277 DNLZQ5SXM8 178 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 PGLYRP4Q96LB8 373 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 LINC00467Q9BRT7 94 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 TPPP3Q9BW30 176 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 CSTL1Q9H114 145 aa10.71□□□□□ -0.69
SENP3-208ENST00000583277 TRGV11A0A075B6L2 103 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 KIR2DL5BA0A0G2JN68 375 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 KIR2DL5BA0A0G2JPC4 375 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 RAB5AP20339 215 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 S100A4P26447 101 aaKnown RBP10.7□□□□□ -0.7
SENP3-208ENST00000583277 APOC4P55056 127 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 RASL11AQ6T310 242 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 ZNF575Q86XF7 245 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 KIR2DL5AQ8N109 375 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 KIR2DL5BQ8NHK3 375 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 TMEM208Q9BTX3 173 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 GOLT1BQ9Y3E0 138 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 DNAH3Q8TD57 4116 aa10.7□□□□□ -0.7
SENP3-208ENST00000583277 A0A1B0GUT8 65 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 GIG44P09565 113 aaPredicted RBP10.69□□□□□ -0.7
SENP3-208ENST00000583277 OR5AL1P0C617 328 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 COX19Q49B96 90 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 LINC01587Q99440 93 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 A0A1B0GW15 77 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 CBY3A6NI87 242 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 SNAI2O43623 268 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 IGHV4-30-4P0DP06 118 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 RIGQ13278 110 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
SENP3-208ENST00000583277 H3BVH4 76 aa10.68□□□□□ -0.7
SENP3-208ENST00000583277 SPINK4O60575 86 aa10.68□□□□□ -0.7
SENP3-208ENST00000583277 S100A8P05109 93 aa10.68□□□□□ -0.7
SENP3-208ENST00000583277 HBBP68871 147 aa10.68□□□□□ -0.7
SENP3-208ENST00000583277 MRPL54Q6P161 138 aaKnown RBP10.68□□□□□ -0.7
SENP3-208ENST00000583277 WDR73Q6P4I2 378 aa10.68□□□□□ -0.7
SENP3-208ENST00000583277 SSBP4Q9BWG4 385 aaPredicted RBP10.68□□□□□ -0.7
SENP3-208ENST00000583277 A0A1B0GXF2 115 aa10.67□□□□□ -0.7
SENP3-208ENST00000583277 A8MZ25 164 aa10.67□□□□□ -0.7
SENP3-208ENST00000583277 GNRH2O43555 120 aa10.67□□□□□ -0.7
SENP3-208ENST00000583277 ARMS2P0C7Q2 107 aa10.67□□□□□ -0.7
SENP3-208ENST00000583277 CACNG7P62955 275 aa10.67□□□□□ -0.7
SENP3-208ENST00000583277 C1orf158Q8N1D5 194 aa10.67□□□□□ -0.7
SENP3-208ENST00000583277 IGHV3-16A0A0C4DH30 117 aa10.66□□□□□ -0.7
SENP3-208ENST00000583277 UBE2CO00762 179 aa10.66□□□□□ -0.7
SENP3-208ENST00000583277 RNASE3P12724 160 aaKnown RBP10.66□□□□□ -0.7
SENP3-208ENST00000583277 RPS10P46783 165 aaKnown RBP10.66□□□□□ -0.7
SENP3-208ENST00000583277 KPRPQ5T749 579 aaPredicted RBP10.66□□□□□ -0.7
SENP3-208ENST00000583277 CSNK1G2-AS1Q8NCQ2 148 aa10.66□□□□□ -0.7
SENP3-208ENST00000583277 SCRT2Q9NQ03 307 aa10.66□□□□□ -0.7
SENP3-208ENST00000583277 MT-ND6P03923 174 aa10.65□□□□□ -0.7
SENP3-208ENST00000583277 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
SENP3-208ENST00000583277 GNB1LQ9BYB4 327 aa10.65□□□□□ -0.7
SENP3-208ENST00000583277 TP53TG3Q9ULZ0 132 aa10.65□□□□□ -0.7
SENP3-208ENST00000583277 PHLDA3Q9Y5J5 127 aa10.65□□□□□ -0.7
SENP3-208ENST00000583277 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms