RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PPIFP30405 207 aaKnown RBP4.5□□□□□ -1.69
RTTN-209ENST00000583043 ZNF876PQ49A33 203 aa4.5□□□□□ -1.69
RTTN-209ENST00000583043 MCRIP2Q9BUT9 160 aaKnown RBP4.5□□□□□ -1.69
RTTN-209ENST00000583043 TP53TG3Q9ULZ0 132 aa4.5□□□□□ -1.69
RTTN-209ENST00000583043 A0A1B0GWB2 263 aa4.5□□□□□ -1.69
RTTN-209ENST00000583043 CEND1Q8N111 149 aa4.5□□□□□ -1.69
RTTN-209ENST00000583043 TRAV12-3A0A0B4J271 114 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 PRB3Q04118 309 aaPredicted RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 Q71RC1 249 aaPredicted RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 A0A1B0GV72 72 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 TP53TG1Q9Y2A0 90 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 TPRP12270 2363 aaKnown RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 TRBV6-5A0A0K0K1A5 114 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 CD33P20138 364 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 OTOGLQ3ZCN5 2332 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 FREM1Q5H8C1 2179 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 STPG4Q8N801 248 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 TIMM21Q9BVV7 248 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 MED12LQ86YW9 2145 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 MALRD1Q5VYJ5 2156 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 INTS1Q8N201 2190 aaKnown RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 USF3Q68DE3 2245 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 RBMY1BA6NDE4 496 aaKnown RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 RBMY1EA6NEQ0 496 aaKnown RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 RBMY1DP0C7P1 496 aaKnown RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 RBMY1A1P0DJD3 496 aaKnown RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 RBMY1CP0DJD4 496 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 DEFB113Q30KQ7 82 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 ASPHD1Q5U4P2 390 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 MRPL35Q9NZE8 188 aaKnown RBP4.49□□□□□ -1.69
RTTN-209ENST00000583043 GTF3C1Q12789 2109 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 IGHV4OR15-8A0A075B7B6 117 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 A0A087WW49 117 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 A0A1W2PPM0 123 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 GAGE12BA1L429 117 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 PRSS2P07478 247 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 DYSFO75923 2080 aa4.49□□□□□ -1.69
RTTN-209ENST00000583043 ACACAQ13085 2346 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 C11orf86A6NJI1 115 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 K7EP13 123 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 SYNJ2BPP57105 145 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 TCTEX1D4Q5JR98 221 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 E9PLD3 99 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 LEPROTO15243 131 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 HERVK_113P63121 156 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 TDRG1Q3Y452 100 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 UTF1Q5T230 341 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 SMKR1H3BMG3 65 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 C4orf3Q8WVX3 66 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 TRBV10-1A0A0K0K1A3 114 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 HTN1P15515 57 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 PCP4P48539 62 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 A0A0J9YX75 114 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 TEX48A0A1B0GUV7 120 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 DEFB112Q30KQ8 113 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 OCIAD2Q56VL3 154 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 GDF5OSQ5U4N7 250 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 PTH2Q96A98 100 aa4.48□□□□□ -1.69
RTTN-209ENST00000583043 TRGV2A0A075B6R0 118 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 IGLV1-40P01703 118 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 HLA-DMBP28068 263 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 DEFB131AP59861 70 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 HERV-K104P63124 156 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 ODF1Q14990 250 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 CD300EQ496F6 205 aaPredicted RBP4.47□□□□□ -1.69
RTTN-209ENST00000583043 SIGMAR1Q99720 223 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 LINC00527Q9UJ94 153 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 ZNF318Q5VUA4 2279 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 MED13Q9UHV7 2174 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 IGFL4Q6B9Z1 124 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 CDPF1Q6NVV7 123 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 HOXD3P31249 432 aaPredicted RBP4.47□□□□□ -1.69
RTTN-209ENST00000583043 RIPPLY3P57055 190 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 KLHL30-AS1Q8NEE0 82 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 TSSC4Q9Y5U2 329 aaPredicted RBP4.47□□□□□ -1.69
RTTN-209ENST00000583043 ADARB2-AS1A8MUL3 147 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 LINC00322Q6ZN03 302 aaPredicted RBP4.47□□□□□ -1.69
RTTN-209ENST00000583043 ZFP2Q6ZN57 461 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 SH2D6Q7Z4S9 175 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 CST9LQ9H4G1 147 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 PRSS29PA6NIE9 313 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 VWC2LB2RUY7 222 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 ATP6V0E2Q8NHE4 81 aa4.47□□□□□ -1.69
RTTN-209ENST00000583043 IGHV4-30-2A0A087WSY4 118 aa4.46□□□□□ -1.69
RTTN-209ENST00000583043 LINC01546A6NGU7 62 aa4.46□□□□□ -1.69
RTTN-209ENST00000583043 H7C423 109 aa4.46□□□□□ -1.69
RTTN-209ENST00000583043 DNAL4O96015 105 aa4.46□□□□□ -1.69
RTTN-209ENST00000583043 PSMG3-AS1Q96PY0 264 aa4.46□□□□□ -1.69
RTTN-209ENST00000583043 TM2D2Q9BX73 214 aa4.46□□□□□ -1.69
RTTN-209ENST00000583043 SPANXCQ9NY87 97 aa4.46□□□□□ -1.69
RTTN-209ENST00000583043 TRBV25-1A0A075B6N4 114 aa4.46□□□□□ -1.7
RTTN-209ENST00000583043 A0A0J9YXY3 114 aa4.46□□□□□ -1.7
RTTN-209ENST00000583043 J3QQQ9 107 aa4.46□□□□□ -1.7
RTTN-209ENST00000583043 K7EQG2 157 aa4.46□□□□□ -1.7
RTTN-209ENST00000583043 NSUN5P1Q3KNT7 163 aa4.46□□□□□ -1.7
RTTN-209ENST00000583043 ARHGAP21Q5T5U3 1957 aa4.46□□□□□ -1.7
RTTN-209ENST00000583043 MRGPRG-AS1Q2M3A8 158 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms